Skip to content
nf-core CI

Ribotricer orf prediction #117

Sign in to view logs

Ribotricer orf prediction

Ribotricer orf prediction #117

Run time

Learn about OS pricing on GitHub Actions
Job Run time
Check for changes
6s
BAM_DEDUP_STATS_SAMTOOLS_UMITOOLS docker NF-latest-everything
49s
MULTIQC docker NF-latest-everything
1s
UMITOOLS_PREPAREFORRSEM docker NF-latest-everything
1s
HISAT2_BUILD docker NF-latest-everything
1s
RIBOTRICER_PREPAREORFS docker NF-latest-everything
1s
SAMTOOLS_FLAGSTAT docker NF-latest-everything
1s
GFFREAD docker NF-latest-everything
1s
FASTQ_SUBSAMPLE_FQ_SALMON docker NF-latest-everything
1s
RSEM_PREPAREREFERENCE docker NF-latest-everything
1s
UTILS_NEXTFLOW_PIPELINE docker NF-latest-everything
1s
SORTMERNA docker NF-latest-everything
1s
BBMAP_BBSPLIT docker NF-latest-everything
49s
FQ_SUBSAMPLE docker NF-latest-everything
1s
BAM_STATS_SAMTOOLS docker NF-latest-everything
49s
STAR_GENOMEGENERATE docker NF-latest-everything
1s
FASTQ_ALIGN_STAR docker NF-latest-everything
1s
FASTQ_FASTQC_UMITOOLS_TRIMGALORE docker NF-latest-everything
1s
SAMTOOLS_STATS docker NF-latest-everything
1s
FASTQ_FASTQC_UMITOOLS_FASTP docker NF-latest-everything
1s
RIBOTISH_PREDICT docker NF-latest-everything
1s
UNTAR docker NF-latest-everything
1s
RIBOTRICER_DETECTORFS docker NF-latest-everything
1s
PIPELINE docker NF-latest-everything
1s
FASTQC docker NF-latest-everything
1s
BAM_SORT_STATS_SAMTOOLS docker NF-latest-everything
51s
CUTADAPT docker NF-latest-everything
1s
HISAT2_EXTRACTSPLICESITES docker NF-latest-everything
1s
SALMON_QUANT docker NF-latest-everything
1s
STAR_ALIGN docker NF-latest-everything
1s
CUSTOM_CATADDITIONALFASTA docker NF-latest-everything
35s
SAMTOOLS_IDXSTATS docker NF-latest-everything
1s
UTILS_NFCORE_PIPELINE docker NF-latest-everything
1s
FASTP docker NF-latest-everything
1s
SAMTOOLS_INDEX docker NF-latest-everything
1s
CUSTOM_GETCHROMSIZES docker NF-latest-everything
49s
TRIMGALORE docker NF-latest-everything
1s
SALMON_INDEX docker NF-latest-everything
1s
UTILS_NFVALIDATION_PLUGIN docker NF-latest-everything
1s
PREPROCESS_RNASEQ docker NF-latest-everything
1s
SAMTOOLS_SORT docker NF-latest-everything
1s
RIBOTISH_QUALITY docker NF-latest-everything
1s
UMITOOLS_DEDUP docker NF-latest-everything
1s
KALLISTO_INDEX docker NF-latest-everything
1s
GUNZIP docker NF-latest-everything
1s
UMITOOLS_EXTRACT docker NF-latest-everything
1s
CAT_FASTQ docker NF-latest-everything
49s
BAM_DEDUP_STATS_SAMTOOLS_UMITOOLS docker NF-23.04
50s
MULTIQC docker NF-23.04
53s
UMITOOLS_PREPAREFORRSEM docker NF-23.04
49s
HISAT2_BUILD docker NF-23.04
38s
RIBOTRICER_PREPAREORFS docker NF-23.04
50s
SAMTOOLS_FLAGSTAT docker NF-23.04
43s
GFFREAD docker NF-23.04
46s
FASTQ_SUBSAMPLE_FQ_SALMON docker NF-23.04
54s
RSEM_PREPAREREFERENCE docker NF-23.04
45s
UTILS_NEXTFLOW_PIPELINE docker NF-23.04
51s
SORTMERNA docker NF-23.04
50s
BBMAP_BBSPLIT docker NF-23.04
58s
FQ_SUBSAMPLE docker NF-23.04
53s
BAM_STATS_SAMTOOLS docker NF-23.04
54s
STAR_GENOMEGENERATE docker NF-23.04
52s
FASTQ_ALIGN_STAR docker NF-23.04
55s
FASTQ_FASTQC_UMITOOLS_TRIMGALORE docker NF-23.04
54s
SAMTOOLS_STATS docker NF-23.04
52s
FASTQ_FASTQC_UMITOOLS_FASTP docker NF-23.04
44s
RIBOTISH_PREDICT docker NF-23.04
53s
UNTAR docker NF-23.04
48s
RIBOTRICER_DETECTORFS docker NF-23.04
54s
PIPELINE docker NF-23.04
55s
FASTQC docker NF-23.04
54s
BAM_SORT_STATS_SAMTOOLS docker NF-23.04
50s
CUTADAPT docker NF-23.04
45s
HISAT2_EXTRACTSPLICESITES docker NF-23.04
45s
SALMON_QUANT docker NF-23.04
53s
STAR_ALIGN docker NF-23.04
51s
CUSTOM_CATADDITIONALFASTA docker NF-23.04
40s
SAMTOOLS_IDXSTATS docker NF-23.04
36s
UTILS_NFCORE_PIPELINE docker NF-23.04
51s
FASTP docker NF-23.04
55s
SAMTOOLS_INDEX docker NF-23.04
52s
CUSTOM_GETCHROMSIZES docker NF-23.04
43s
TRIMGALORE docker NF-23.04
52s
SALMON_INDEX docker NF-23.04
39s
UTILS_NFVALIDATION_PLUGIN docker NF-23.04
52s
PREPROCESS_RNASEQ docker NF-23.04
53s
SAMTOOLS_SORT docker NF-23.04
52s
RIBOTISH_QUALITY docker NF-23.04
54s
UMITOOLS_DEDUP docker NF-23.04
51s
KALLISTO_INDEX docker NF-23.04
56s
GUNZIP docker NF-23.04
53s
UMITOOLS_EXTRACT docker NF-23.04
51s
CAT_FASTQ docker NF-23.04
54s
confirm-pass
1s
44m 40s