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V1.0.0 release review fixes #177

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V1.0.0 release review fixes

V1.0.0 release review fixes #177

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Job Run time
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7s
modules/nf-core/umitools/dedup/tests/main.nf.test docker NF-latest-everything
1m 17s
modules/nf-core/ribotish/quality/tests/main.nf.test docker NF-latest-everything
1m 31s
modules/nf-core/rsem/preparereference/tests/main.nf.test docker NF-latest-everything
47s
modules/nf-core/multiqc/tests/main.nf.test docker NF-latest-everything
1m 27s
modules/nf-core/sortmerna/tests/main.nf.test docker NF-latest-everything
1m 55s
subworkflows/nf-core/bam_sort_stats_samtools/tests/main.nf.test docker NF-latest-everything
47s
modules/nf-core/tximeta/tximport/tests/main.nf.test docker NF-latest-everything
2m 8s
modules/nf-core/cat/fastq/tests/main.nf.test docker NF-latest-everything
1m 17s
modules/nf-core/kallisto/index/tests/main.nf.test docker NF-latest-everything
31s
modules/nf-core/anota2seq/anota2seqrun/tests/main.nf.test docker NF-latest-everything
1m 43s
modules/nf-core/ribotricer/prepareorfs/tests/main.nf.test docker NF-latest-everything
1m 20s
modules/nf-core/kallisto/quant/tests/main.nf.test docker NF-latest-everything
44s
modules/nf-core/gffread/tests/main.nf.test docker NF-latest-everything
59s
modules/nf-core/samtools/flagstat/tests/main.nf.test docker NF-latest-everything
42s
subworkflows/nf-core/preprocess_rnaseq/tests/main.nf.test docker NF-latest-everything
1m 49s
subworkflows/nf-core/fastq_align_star/tests/main.nf.test docker NF-latest-everything
3m 19s
modules/nf-core/ribotricer/detectorfs/tests/main.nf.test docker NF-latest-everything
6m 32s
modules/nf-core/gunzip/tests/main.nf.test docker NF-latest-everything
32s
subworkflows/nf-core/fastq_subsample_fq_salmon/tests/main.nf.test docker NF-latest-everything
57s
subworkflows/nf-core/fastq_fastqc_umitools_fastp/tests/main.nf.test docker NF-latest-everything
3m 6s
modules/nf-core/cutadapt/tests/main.nf.test docker NF-latest-everything
41s
modules/nf-core/summarizedexperiment/summarizedexperiment/tests/main.nf.test docker NF-latest-everything
4m 25s
subworkflows/nf-core/fastq_fastqc_umitools_trimgalore/tests/main.nf.test docker NF-latest-everything
1m 47s
modules/nf-core/samtools/stats/tests/main.nf.test docker NF-latest-everything
1m 0s
subworkflows/nf-core/quantify_pseudo_alignment/tests/main.nf.test docker NF-latest-everything
2m 30s
modules/nf-core/fq/subsample/tests/main.nf.test docker NF-latest-everything
1m 11s
subworkflows/nf-core/utils_nfvalidation_plugin/tests/main.nf.test docker NF-latest-everything
50s
modules/nf-core/samtools/sort/tests/main.nf.test docker NF-latest-everything
1m 1s
modules/nf-core/umitools/extract/tests/main.nf.test docker NF-latest-everything
56s
modules/nf-core/ribotish/predict/tests/main.nf.test docker NF-latest-everything
2m 33s
subworkflows/nf-core/bam_stats_samtools/tests/main.nf.test docker NF-latest-everything
1m 5s
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.workflow.nf.test docker NF-latest-everything
24s
modules/nf-core/custom/tx2gene/tests/main.nf.test docker NF-latest-everything
52s
modules/nf-core/salmon/index/tests/main.nf.test docker NF-latest-everything
48s
modules/nf-core/custom/getchromsizes/tests/main.nf.test docker NF-latest-everything
55s
tests/main.nf.test docker NF-latest-everything
5m 11s
modules/nf-core/umitools/prepareforrsem/tests/main.nf.test docker NF-latest-everything
1m 13s
subworkflows/nf-core/bam_dedup_stats_samtools_umitools/tests/main.nf.test docker NF-latest-everything
47s
modules/nf-core/custom/catadditionalfasta/tests/main.nf.test docker NF-latest-everything
34s
modules/nf-core/salmon/quant/tests/main.nf.test docker NF-latest-everything
1m 23s
modules/nf-core/fastqc/tests/main.nf.test docker NF-latest-everything
2m 7s
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.function.nf.test docker NF-latest-everything
1m 11s
modules/nf-core/bbmap/bbsplit/tests/main.nf.test docker NF-latest-everything
58s
modules/nf-core/untar/tests/main.nf.test docker NF-latest-everything
1m 10s
modules/nf-core/star/genomegenerate/tests/main.nf.test docker NF-latest-everything
1m 10s
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.workflow.nf.test docker NF-latest-everything
55s
modules/nf-core/fastp/tests/main.nf.test docker NF-latest-everything
2m 17s
modules/nf-core/samtools/index/tests/main.nf.test docker NF-latest-everything
1m 10s
modules/nf-core/samtools/idxstats/tests/main.nf.test docker NF-latest-everything
30s
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.function.nf.test docker NF-latest-everything
46s
modules/nf-core/trimgalore/tests/main.nf.test docker NF-latest-everything
59s
modules/nf-core/star/align/tests/main.nf.test docker NF-latest-everything
5m 56s
modules/nf-core/umitools/dedup/tests/main.nf.test docker NF-23.04
1m 17s
modules/nf-core/ribotish/quality/tests/main.nf.test docker NF-23.04
1m 15s
modules/nf-core/rsem/preparereference/tests/main.nf.test docker NF-23.04
42s
modules/nf-core/multiqc/tests/main.nf.test docker NF-23.04
1m 49s
modules/nf-core/sortmerna/tests/main.nf.test docker NF-23.04
2m 7s
subworkflows/nf-core/bam_sort_stats_samtools/tests/main.nf.test docker NF-23.04
42s
modules/nf-core/tximeta/tximport/tests/main.nf.test docker NF-23.04
2m 7s
modules/nf-core/cat/fastq/tests/main.nf.test docker NF-23.04
1m 29s
modules/nf-core/kallisto/index/tests/main.nf.test docker NF-23.04
38s
modules/nf-core/anota2seq/anota2seqrun/tests/main.nf.test docker NF-23.04
1m 27s
modules/nf-core/ribotricer/prepareorfs/tests/main.nf.test docker NF-23.04
1m 17s
modules/nf-core/kallisto/quant/tests/main.nf.test docker NF-23.04
46s
modules/nf-core/gffread/tests/main.nf.test docker NF-23.04
40s
modules/nf-core/samtools/flagstat/tests/main.nf.test docker NF-23.04
34s
subworkflows/nf-core/preprocess_rnaseq/tests/main.nf.test docker NF-23.04
1m 28s
subworkflows/nf-core/fastq_align_star/tests/main.nf.test docker NF-23.04
3m 38s
modules/nf-core/ribotricer/detectorfs/tests/main.nf.test docker NF-23.04
5m 48s
modules/nf-core/gunzip/tests/main.nf.test docker NF-23.04
26s
subworkflows/nf-core/fastq_subsample_fq_salmon/tests/main.nf.test docker NF-23.04
46s
subworkflows/nf-core/fastq_fastqc_umitools_fastp/tests/main.nf.test docker NF-23.04
2m 55s
modules/nf-core/cutadapt/tests/main.nf.test docker NF-23.04
37s
modules/nf-core/summarizedexperiment/summarizedexperiment/tests/main.nf.test docker NF-23.04
4m 30s
subworkflows/nf-core/fastq_fastqc_umitools_trimgalore/tests/main.nf.test docker NF-23.04
1m 57s
modules/nf-core/samtools/stats/tests/main.nf.test docker NF-23.04
1m 17s
subworkflows/nf-core/quantify_pseudo_alignment/tests/main.nf.test docker NF-23.04
2m 32s
modules/nf-core/fq/subsample/tests/main.nf.test docker NF-23.04
1m 7s
subworkflows/nf-core/utils_nfvalidation_plugin/tests/main.nf.test docker NF-23.04
1m 5s
modules/nf-core/samtools/sort/tests/main.nf.test docker NF-23.04
1m 6s
modules/nf-core/umitools/extract/tests/main.nf.test docker NF-23.04
47s
modules/nf-core/ribotish/predict/tests/main.nf.test docker NF-23.04
2m 46s
subworkflows/nf-core/bam_stats_samtools/tests/main.nf.test docker NF-23.04
53s
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.workflow.nf.test docker NF-23.04
36s
modules/nf-core/custom/tx2gene/tests/main.nf.test docker NF-23.04
48s
modules/nf-core/salmon/index/tests/main.nf.test docker NF-23.04
43s
modules/nf-core/custom/getchromsizes/tests/main.nf.test docker NF-23.04
39s
tests/main.nf.test docker NF-23.04
6m 47s
modules/nf-core/umitools/prepareforrsem/tests/main.nf.test docker NF-23.04
1m 12s
subworkflows/nf-core/bam_dedup_stats_samtools_umitools/tests/main.nf.test docker NF-23.04
1m 9s
modules/nf-core/custom/catadditionalfasta/tests/main.nf.test docker NF-23.04
39s
modules/nf-core/salmon/quant/tests/main.nf.test docker NF-23.04
1m 35s
modules/nf-core/fastqc/tests/main.nf.test docker NF-23.04
2m 5s
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.function.nf.test docker NF-23.04
1m 9s
modules/nf-core/bbmap/bbsplit/tests/main.nf.test docker NF-23.04
1m 2s
modules/nf-core/untar/tests/main.nf.test docker NF-23.04
43s
modules/nf-core/star/genomegenerate/tests/main.nf.test docker NF-23.04
1m 11s
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.workflow.nf.test docker NF-23.04
39s
modules/nf-core/fastp/tests/main.nf.test docker NF-23.04
2m 44s
modules/nf-core/samtools/index/tests/main.nf.test docker NF-23.04
54s
modules/nf-core/samtools/idxstats/tests/main.nf.test docker NF-23.04
32s
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.function.nf.test docker NF-23.04
35s
modules/nf-core/trimgalore/tests/main.nf.test docker NF-23.04
52s
modules/nf-core/star/align/tests/main.nf.test docker NF-23.04
6m 49s
confirm-pass
1s
2h 46m 37s