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fix-linting.yml
346 workflow runs
346 workflow runs

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Cell Ranger ARC null path value Fix linting from a comment #821: Issue comment #389 (comment) created by RPSeaman
November 7, 2024 21:02 3s
November 7, 2024 21:02 3s
nextflow inspect does not work due to missing parameters Fix linting from a comment #820: Issue comment #347 (comment) created by grst
November 7, 2024 13:28 2s
November 7, 2024 13:28 2s
CellRanger Multi => add combined h5ad files in mtx_conversions Fix linting from a comment #819: Issue comment #378 (comment) created by grst
November 7, 2024 13:26 2s
November 7, 2024 13:26 2s
Crashes due to trying to unzip file that is not zipped Fix linting from a comment #818: Issue comment #380 (comment) created by grst
November 7, 2024 13:26 2s
November 7, 2024 13:26 2s
gene symbols for alevin-fry Fix linting from a comment #817: Issue comment #184 (comment) created by grst
November 7, 2024 13:19 2s
November 7, 2024 13:19 2s
Include --expect-cells when using --aligner cellranger Fix linting from a comment #816: Issue comment #182 (comment) created by grst
November 7, 2024 13:18 2s
November 7, 2024 13:18 2s
Reduce the number of published files from alevin-fry output Fix linting from a comment #815: Issue comment #178 (comment) created by grst
November 7, 2024 13:12 2s
November 7, 2024 13:12 2s
Add multiome support (scATAC + scRNA) Fix linting from a comment #814: Issue comment #174 (comment) created by grst
November 7, 2024 13:12 2s
November 7, 2024 13:12 2s
Add support for CITE-seq data processing Fix linting from a comment #813: Issue comment #99 (comment) created by grst
November 7, 2024 13:08 3s
November 7, 2024 13:08 3s
Utilize central modules for simpleaf workflow Fix linting from a comment #812: Issue comment #296 (comment) created by grst
November 7, 2024 13:04 2s
November 7, 2024 13:04 2s
Standardize conversion workflow Fix linting from a comment #811: Issue comment #369 (comment) created by fmalmeida
November 6, 2024 13:39 3s
November 6, 2024 13:39 3s
Altos auto detection chemistry modules Fix linting from a comment #810: Issue comment #391 (comment) created by wzheng0520
November 4, 2024 23:23 2s
November 4, 2024 23:23 2s
Altos auto detection chemistry modules Fix linting from a comment #809: Issue comment #391 (comment) created by wzheng0520
November 4, 2024 21:57 1s
November 4, 2024 21:57 1s
Add auto chemistry detection for solving mixture of 10X scRNA-Seq chemistries (alevin, kallisto, star) Fix linting from a comment #808: Issue comment #388 (comment) created by wzheng0520
November 4, 2024 17:46 2s
November 4, 2024 17:46 2s
Allow pre-built cellranger index, CellrangerARC index, simpleaf Index, and simpleaf tx2pgene load from igenomes.json Fix linting from a comment #807: Issue comment #371 (comment) created by FelixKrueger
November 2, 2024 16:35 2s
November 2, 2024 16:35 2s
MTX_CONVERSION:MTX_TO_SEURAT fails with certain feature names Fix linting from a comment #806: Issue comment #385 (comment) created by ChristopherBarrington
November 1, 2024 16:34 3s
November 1, 2024 16:34 3s
Draft: Add feature for sample demultiplexing followed by immune profiling Fix linting from a comment #805: Issue comment #365 (comment) created by nf-core-bot
November 1, 2024 14:16 2s
November 1, 2024 14:16 2s
Error at SIMPLEAF_INDEX for user supplied genome/annotation Fix linting from a comment #804: Issue comment #253 (comment) created by colinwxl
October 31, 2024 08:00 2s
October 31, 2024 08:00 2s
Add auto chemistry detection for solving mixture of 10X scRNA-Seq chemistries (alevin, kallisto, star) Fix linting from a comment #803: Issue comment #388 (comment) created by grst
October 31, 2024 07:24 3s
October 31, 2024 07:24 3s
MTX_TO_H5AD module cannot take ch_star_index Fix linting from a comment #802: Issue comment #370 (comment) created by wzheng0520
October 30, 2024 16:47 3s
October 30, 2024 16:47 3s
feat(cellranger count and multi): Add create-bam option to cellranger count and multi pipelines Fix linting from a comment #801: Issue comment #387 (comment) created by grst
October 30, 2024 11:41 2s
October 30, 2024 11:41 2s
feat(cellranger count and multi): Add create-bam option to cellranger count and multi pipelines Fix linting from a comment #800: Issue comment #387 (comment) created by kopichris
October 30, 2024 11:34 2s
October 30, 2024 11:34 2s
Allow pre-built cellranger index, CellrangerARC index, simpleaf Index, and simpleaf tx2pgene load from igenomes.json Fix linting from a comment #799: Issue comment #371 (comment) created by FelixKrueger
October 30, 2024 09:24 2s
October 30, 2024 09:24 2s
Standardize conversion workflow Fix linting from a comment #798: Issue comment #369 (comment) created by nf-core-bot
October 30, 2024 08:03 30m 32s
October 30, 2024 08:03 30m 32s
feat(cellranger count and multi): Add create-bam option to cellranger count and multi pipelines Fix linting from a comment #797: Issue comment #387 (comment) created by nf-core-bot
October 29, 2024 11:01 2s
October 29, 2024 11:01 2s