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Fix gzip error #382

Merged
merged 4 commits into from
Oct 28, 2024
Merged

Fix gzip error #382

merged 4 commits into from
Oct 28, 2024

Commits on Aug 15, 2024

  1. Merge pull request nf-core#356 from nf-core/dev 

    Release v2.7.1
    @grst
    grst authored Aug 15, 2024
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Commits on Oct 11, 2024

  1. Fix nf-core#380

    @esrice
    esrice committed Oct 11, 2024
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  2. Fix same error as last commit, but for alevin 

    The alevin-fry workflow for this pipeline has the same issue as the STAR
workflow: it assumes the whitelist is gzipped, and crashes if it is not.
This commit fixes that by only trying to unzip the whitelist if it is in
fact gzipped.
    @esrice
    esrice committed Oct 11, 2024
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Commits on Oct 28, 2024

  1. Fix potential filename conflict 

    Call the uncompressed whitelist whitelist.uncompressed.txt instead of
whitelist.txt.
    @esrice
    esrice committed Oct 28, 2024
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