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fix-linting.yml
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edger_qc module nf-test is trying to check for undeterministic files and it fails Fix linting from a comment #649: Issue comment #450 (comment) created by atrigila
October 1, 2024 17:39 2s
October 1, 2024 17:39 2s
Addressing TODOs in pipeline, general cleanup of variables Fix linting from a comment #648: Issue comment #400 (comment) created by nschcolnicov
October 1, 2024 16:29 2s
October 1, 2024 16:29 2s
Replace untarfiles with untar Fix linting from a comment #647: Issue comment #449 (comment) created by nschcolnicov
October 1, 2024 16:29 2s
October 1, 2024 16:29 2s
Improve pipeline tests for different protocols Fix linting from a comment #646: Issue comment #366 (comment) created by nschcolnicov
October 1, 2024 16:22 2s
October 1, 2024 16:22 2s
--mirna_gtf for organism with no miRBase GFF file Fix linting from a comment #645: Issue comment #329 (comment) created by atrigila
October 1, 2024 13:49 3s
October 1, 2024 13:49 3s
pipeline fails at same step each time Fix linting from a comment #644: Issue comment #453 (comment) created by atrigila
October 1, 2024 13:16 2s
October 1, 2024 13:16 2s
Addressing TODOs in pipeline, general cleanup of variables Fix linting from a comment #643: Issue comment #400 (comment) created by nschcolnicov
September 30, 2024 13:57 2s
September 30, 2024 13:57 2s
Make sample name cleaning regex configurable Fix linting from a comment #642: Issue comment #64 (comment) created by apeltzer
September 30, 2024 13:21 2s
September 30, 2024 13:21 2s
edger_qc module nf-test is trying to check for undeterministic files and it fails Fix linting from a comment #641: Issue comment #450 (comment) created by nschcolnicov
September 30, 2024 13:04 2s
September 30, 2024 13:04 2s
General cleanup Fix linting from a comment #640: Issue comment #447 (comment) created by nschcolnicov
September 30, 2024 13:03 2s
September 30, 2024 13:03 2s
General cleanup Fix linting from a comment #639: Issue comment #447 (comment) created by atrigila
September 30, 2024 12:36 2s
September 30, 2024 12:36 2s
Make sample name cleaning regex configurable Fix linting from a comment #638: Issue comment #64 (comment) created by atrigila
September 30, 2024 12:32 3s
September 30, 2024 12:32 3s
General cleanup Fix linting from a comment #637: Issue comment #447 (comment) created by nschcolnicov
September 30, 2024 12:27 3s
September 30, 2024 12:27 3s
General cleanup Fix linting from a comment #636: Issue comment #447 (comment) created by atrigila
September 30, 2024 12:16 3s
September 30, 2024 12:16 3s
The pipeline doesn't finish but is marked as completed Fix linting from a comment #635: Issue comment #415 (comment) created by apeltzer
September 27, 2024 14:11 2s
September 27, 2024 14:11 2s
The pipeline doesn't finish but is marked as completed Fix linting from a comment #634: Issue comment #415 (comment) created by karlaarz
September 27, 2024 13:26 2s
September 27, 2024 13:26 2s
--mirna_gtf for organism with no miRBase GFF file Fix linting from a comment #633: Issue comment #329 (comment) created by nschcolnicov
September 26, 2024 15:04 3s
September 26, 2024 15:04 3s
Inconsistencies in hairpins aligned read numbers Fix linting from a comment #632: Issue comment #94 (comment) created by nschcolnicov
September 26, 2024 12:34 2s
September 26, 2024 12:34 2s
INDEX_GENOME: Bowtie build error Fix linting from a comment #631: Issue comment #340 (comment) created by apeltzer
September 26, 2024 11:33 2s
September 26, 2024 11:33 2s
Improve the contaminant filter Fix linting from a comment #630: Issue comment #406 (comment) created by apeltzer
September 26, 2024 11:32 2s
September 26, 2024 11:32 2s
The pipeline doesn't finish but is marked as completed Fix linting from a comment #629: Issue comment #415 (comment) created by apeltzer
September 26, 2024 07:31 2s
September 26, 2024 07:31 2s
Migrate bowtie Fix linting from a comment #628: Issue comment #444 (comment) created by nschcolnicov
September 25, 2024 21:27 2s
September 25, 2024 21:27 2s
Inconsistencies in hairpins aligned read numbers Fix linting from a comment #627: Issue comment #94 (comment) created by lpantano
September 25, 2024 20:50 2s
September 25, 2024 20:50 2s
Add nf-core bowtie align to smrnaseq Fix linting from a comment #626: Issue comment #436 (comment) created by nschcolnicov
September 25, 2024 18:42 2s
September 25, 2024 18:42 2s
The pipeline doesn't finish but is marked as completed Fix linting from a comment #625: Issue comment #415 (comment) created by nschcolnicov
September 25, 2024 18:40 2s
September 25, 2024 18:40 2s