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Update subworkflows/local/mirna_quant.nf
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Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
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apeltzer and jfy133 authored Oct 8, 2024
1 parent b1e03e8 commit de1714b
Showing 1 changed file with 1 addition and 4 deletions.
5 changes: 1 addition & 4 deletions subworkflows/local/mirna_quant.nf
Original file line number Diff line number Diff line change
Expand Up @@ -101,10 +101,7 @@ workflow MIRNA_QUANT {
.map{ gtf, species -> [ [id:species.toString()], gtf, species ] }
.collect()

BAM_STATS_MIRNA_MIRTOP(
BOWTIE_MAP_SEQCLUSTER.out.bam,
FORMAT_HAIRPIN.out.formatted_fasta,
ch_mirna_gtf_species )
BAM_STATS_MIRNA_MIRTOP(BOWTIE_MAP_SEQCLUSTER.out.bam, FORMAT_HAIRPIN.out.formatted_fasta, ch_mirna_gtf_species )

ch_mirtop_logs = BAM_STATS_MIRNA_MIRTOP.out.stats_log
ch_versions = ch_versions.mix(BAM_STATS_MIRNA_MIRTOP.out.versions)
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