Template: test pipeline with conda and singularity on PRs to master #7767
mirpedrolAnnotations
53 warnings
|
Run pipelines/lint/test_actions_awsfulltest.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run pipelines/lint/test_actions_awstest.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run pipelines/lint/test_modules_json.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run pipelines/lint/test_version_consistency.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run pipelines/lint/test_files_unchanged.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run pipelines/lint/test_configs.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run pipelines/lint/test_nfcore_yml.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run pipelines/lint/test_template_strings.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run pipelines/lint/test_merge_markers.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run pipelines/test_list.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run pipelines/test_create.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run pipelines/lint/test_multiqc_config.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run pipelines/test_bump_version.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run pipelines/lint/test_actions_ci.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run pipelines/lint/test_files_exist.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run pipelines/lint/test_plugin_includes.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run pipelines/lint/test_actions_schema_validation.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run modules/test_bump_versions.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run modules/test_remove.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run pipelines/test_create_logo.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run modules/test_info.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run pipelines/test_download.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run pipelines/lint/test_nextflow_config.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run pipelines/test_lint.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run modules/test_create.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run modules/test_patch.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run modules/test_list.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run modules/test_install.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run pipelines/test_create_app.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run pipelines/test_launch.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run test_cli.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run test_subworkflows.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run modules/test_modules_json.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run test_pipelines.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run test_lint_utils.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run pipelines/test_params_file.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run test_modules.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run test_test_utils.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run subworkflows/test_info.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run subworkflows/test_create.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run pipelines/test_refgenie.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run subworkflows/test_list.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run pipelines/test_sync.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run subworkflows/test_remove.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run modules/test_update.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run subworkflows/test_install.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run test_utils.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run subworkflows/test_lint.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run pipelines/test_schema.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run modules/test_lint.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run subworkflows/test_update.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
Run test_components.py with Python 3.8 on ubuntu-latest
No files were found with the provided path: ./snapshot_report.html. No artifacts will be uploaded.
|
|
coverage
Codecov: Failed to properly create commit: The process '/home/runner/work/_actions/codecov/codecov-action/5ecb98a3c6b747ed38dc09f787459979aebb39be/dist/codecov' failed with exit code 1
|
Artifacts
Produced during runtime
| Name | Size | |
|---|---|---|
|
coverage_modules__test_bump_versions.py
|
5.7 KB |
|
|
coverage_modules__test_create.py
|
5.65 KB |
|
|
coverage_modules__test_info.py
|
5.78 KB |
|
|
coverage_modules__test_install.py
|
5.71 KB |
|
|
coverage_modules__test_lint.py
|
6.96 KB |
|
|
coverage_modules__test_list.py
|
5.76 KB |
|
|
coverage_modules__test_modules_json.py
|
5.82 KB |
|
|
coverage_modules__test_patch.py
|
5.91 KB |
|
|
coverage_modules__test_remove.py
|
5.73 KB |
|
|
coverage_modules__test_update.py
|
5.94 KB |
|
|
coverage_pipelines__lint__test_actions_awsfulltest.py
|
6.45 KB |
|
|
coverage_pipelines__lint__test_actions_awstest.py
|
6.44 KB |
|
|
coverage_pipelines__lint__test_actions_ci.py
|
6.45 KB |
|
|
coverage_pipelines__lint__test_actions_schema_validation.py
|
6.44 KB |
|
|
coverage_pipelines__lint__test_configs.py
|
6.45 KB |
|
|
coverage_pipelines__lint__test_files_exist.py
|
6.46 KB |
|
|
coverage_pipelines__lint__test_files_unchanged.py
|
6.46 KB |
|
|
coverage_pipelines__lint__test_merge_markers.py
|
6.44 KB |
|
|
coverage_pipelines__lint__test_modules_json.py
|
6.45 KB |
|
|
coverage_pipelines__lint__test_multiqc_config.py
|
6.5 KB |
|
|
coverage_pipelines__lint__test_nextflow_config.py
|
6.5 KB |
|
|
coverage_pipelines__lint__test_nfcore_yml.py
|
6.45 KB |
|
|
coverage_pipelines__lint__test_plugin_includes.py
|
6.44 KB |
|
|
coverage_pipelines__lint__test_template_strings.py
|
6.75 KB |
|
|
coverage_pipelines__lint__test_version_consistency.py
|
6.51 KB |
|
|
coverage_pipelines__test_bump_version.py
|
5.17 KB |
|
|
coverage_pipelines__test_create.py
|
5.12 KB |
|
|
coverage_pipelines__test_create_app.py
|
5.14 KB |
|
|
coverage_pipelines__test_create_logo.py
|
5.14 KB |
|
|
coverage_pipelines__test_download.py
|
5.52 KB |
|
|
coverage_pipelines__test_launch.py
|
5.31 KB |
|
|
coverage_pipelines__test_lint.py
|
6.93 KB |
|
|
coverage_pipelines__test_list.py
|
5.04 KB |
|
|
coverage_pipelines__test_params_file.py
|
5.2 KB |
|
|
coverage_pipelines__test_refgenie.py
|
5.06 KB |
|
|
coverage_pipelines__test_schema.py
|
5.23 KB |
|
|
coverage_pipelines__test_sync.py
|
5.22 KB |
|
|
coverage_subworkflows__test_create.py
|
6.5 KB |
|
|
coverage_subworkflows__test_info.py
|
6.6 KB |
|
|
coverage_subworkflows__test_install.py
|
6.57 KB |
|
|
coverage_subworkflows__test_lint.py
|
6.75 KB |
|
|
coverage_subworkflows__test_list.py
|
6.59 KB |
|
|
coverage_subworkflows__test_remove.py
|
6.6 KB |
|
|
coverage_subworkflows__test_update.py
|
6.7 KB |
|
|
coverage_test_cli.py
|
6.88 KB |
|
|
coverage_test_components.py
|
5.43 KB |
|
|
coverage_test_lint_utils.py
|
5.01 KB |
|
|
coverage_test_modules.py
|
5.63 KB |
|
|
coverage_test_pipelines.py
|
5.02 KB |
|
|
coverage_test_subworkflows.py
|
6.32 KB |
|
|
coverage_test_test_utils.py
|
5.02 KB |
|
|
coverage_test_utils.py
|
5.17 KB |
|