Merge branch 'dev' into maxulysse-patch-7

nf-core · Oct 15, 2024 · c5cff7a · c5cff7a
2 parents 5487a62 + f2252c5
commit c5cff7a
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diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -4,6 +4,7 @@
 
 ### Template
 
+- Keep pipeline name in version.yml file ([#3223](https://github.com/nf-core/tools/pull/3223))
 - Do not assume pipeline name is url ([#3225](https://github.com/nf-core/tools/pull/3225))
 
 ### Download

diff --git a/nf_core/pipeline-template/workflows/pipeline.nf b/nf_core/pipeline-template/workflows/pipeline.nf
@@ -47,7 +47,7 @@ workflow {{ short_name|upper }} {
     softwareVersionsToYAML(ch_versions)
         .collectFile(
             storeDir: "${params.outdir}/pipeline_info",
-            name: {% if is_nfcore %}'nf_core_' {% else %} '' {% endif %} + 'pipeline_software_' + {% if multiqc %} 'mqc_' {% else %} '' {% endif %} + 'versions.yml',
+            name: {% if is_nfcore %}'nf_core_'  + {% endif %} '{{ short_name }}_software_' {% if multiqc %} + 'mqc_' {% endif %} + 'versions.yml',
             sort: true,
             newLine: true
         ).set { ch_collated_versions }