Multi-threading implemented at the extension step #8
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JFsanchezherrero
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@JFsanchezherrero Can you remove the source files of the CPAN modules ( |
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For your information I've just added some basic Continuous Integration testing using TravisCI, but to use it you would need to rebase this PR on top of the |
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I have discarded CPAN modules but I am afraid that you should tell the user to have it installed in their computer as it would not run properly. |
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At the contig extension step, I have add some code to split the given fasta file in as many CPUs as expected and send multiple threads for each block of data.
As new requirements SSPACE needs the perl module Parallel and Cwd. They have also been included in this commit.