Open Seeds paper

This GitHub repository store sources (supplementary material, notebooks to generate figures) for the Open Seeds paper and its website.

Running locally

Requirements

• Install conda

  $ make install-conda
  

• Create the conda environment

  $ make create-env
  

Generate figures

Jupyter Notebooks have been used to generate the graphs for the paper.

Usage

• Launch Jupyter to access the notebooks to generate graphs

  $ make run-jupyter
  

• Go to http://localhost:8888 (a page should open automatically in your browser)

• Open the interesting notebook

  For running the microgrants & honoraria notebook, you will need first to export the output of 2 searches on CiviCRM and add them in the data/openseeds folder to update files

  • data/openseeds/honorarium.csv by "Open Seeds honorarium" search
  • data/openseeds/microgrants.csv by "Open Seeds microgrants" search

• Make changes and save them

Generate the website

• Run Jupyter book

  $ make build-jupyterbook
  

• Open _build/html/index.html in a browser

License

Code is MIT, Content is CC-BY.

This work is licensed under CC BY 4.0