Repositories list

• GATK-SNP-Calling

  Public
  Perl

  •

  GNU General Public License v3.0

  •0•3•0•0•Updated Jun 21, 2024Jun 21, 2024

• high_dim_mediation

  Public
  R

  •5•1•0•0•Updated May 13, 2024May 13, 2024

• unmethylated-regions_UMR-extractor-WGBS

  Public
  HTML

  •0•1•0•0•Updated Nov 16, 2023Nov 16, 2023

• DeepSignalplantPractise

  Public
  Python

  •0•0•0•0•Updated Nov 10, 2023Nov 10, 2023

• ACRs_by_MNase-seq

  Public
  Shell

  •0•0•0•0•Updated Nov 2, 2023Nov 2, 2023

• anchorwave_protocol

  Public
  This protocol is to help user implement AnchorWave successfully, including two examples to illustrate two main functions"proali" and "genoAli".

  R

  •

  MIT License

  •0•5•0•0•Updated Aug 3, 2023Aug 3, 2023

• BS-seq_Analysis

  Public
  Shell

  •1•1•0•0•Updated Apr 15, 2023Apr 15, 2023

• DNA-dev

  Public
  Distributed Networks Architecture Blockchain

  Go

  •

  Apache License 2.0

  •141•0•0•0•Updated Sep 17, 2022Sep 17, 2022

• POInT-WGT

  Public
  0•1•0•0•Updated Sep 15, 2022Sep 15, 2022

• Molecular_dating_with_BEAST

  Public
  Perl

  •0•0•0•0•Updated Jul 25, 2022Jul 25, 2022

• Nanopore_genome_assembly

  Public
  Shell

  •2•1•0•0•Updated Jul 14, 2022Jul 14, 2022

• Gene_Annotation_Pipeline

  Public
  Shell

  •3•3•0•0•Updated Jul 13, 2022Jul 13, 2022

• bioprotocol_2104072

  Public
  HTML

  •2•0•0•1•Updated Jul 5, 2022Jul 5, 2022

• chromosome_scaffolding_of_simple_diploid_genomes_using_ALLHiC

  Public
  HTML

  •1•5•0•0•Updated Jul 4, 2022Jul 4, 2022

• bioprotocol_2104071

  Public
  HTML

  •2•0•0•0•Updated Jul 1, 2022Jul 1, 2022

• TAD-and-loop-identification-workflows

  Public
  R

  •4•7•0•0•Updated Jun 28, 2022Jun 28, 2022

• Maize_ATAC_STARR_seq

  Public
  HTML

  •2•2•0•0•Updated Jun 16, 2022Jun 16, 2022

• Genome-Environment_Association_Analyses_with_BayPass

  Public
  R

  •0•2•0•0•Updated Jun 15, 2022Jun 15, 2022

• Bayesian-regression-methods-for-genomic-prediction-and-genome-wide-association-studies

  Public
  Julia

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Jun 13, 2022Jun 13, 2022

• GO_KEGG_enrichment_analysis_for_rice_genes

  Public
  R

  •5•7•0•0•Updated Jun 1, 2022Jun 1, 2022

• Plant_genome_Hi-C_scaffolding

  Public
  4•1•0•0•Updated May 30, 2022May 30, 2022

• MAPGD-for-plants

  Public
  Shell

  •0•0•0•0•Updated May 9, 2022May 9, 2022

• Bioinformatics-Recipes-for-Plant-Genomics

  Public
  HTML

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  GNU General Public License v3.0

  •2•1•0•0•Updated Apr 26, 2022Apr 26, 2022

• CERIS_EP

  Public
  R

  •0•0•0•0•Updated Apr 15, 2022Apr 15, 2022

• Normalization-and-Batch-Effect-Removal

  Public
  R

  •3•1•0•0•Updated Mar 31, 2022Mar 31, 2022

• Maize_Genome_Assembly_With_PacBio_Reads

  Public
  2•1•0•0•Updated Mar 28, 2022Mar 28, 2022

• eQTL_Analysis_for_Rice_RIL_population

  Public
  R

  •2•4•0•0•Updated Mar 26, 2022Mar 26, 2022

• Pipeline_for_Identification_m6A_AS_and_APA_with_Long_Read

  Public
  An Analysis Pipeline for Identification of RNA Modification, Alternative Splicing and Polyadenylation Using Third-Generation Sequencing

  Shell

  •

  GNU General Public License v3.0

  •2•3•0•0•Updated Mar 14, 2022Mar 14, 2022

• Differential-Expression-Analysis

  Public
  R

  •3•0•0•0•Updated Mar 7, 2022Mar 7, 2022

• NGS_transcriptome_assembly

  Public
  HTML

  •0•0•0•0•Updated Feb 13, 2022Feb 13, 2022