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    211 repositories

    • data-portal

      Public
      Windmill: data portal for metadata submission and query
      gen3
      JavaScript
      •
      Apache License 2.0
      •44•28•43•17•Updated Oct 24, 2024Oct 24, 2024

    • gitops-qa

      Public
      gen3-gitops
      HTML
      •
      Apache License 2.0
      •7•2•0•160•Updated Oct 24, 2024Oct 24, 2024

    • midrc_dictionary

      Public
      A data dictionary for the Medical Imaging Resource Data Commons (MIDRC).
      Python
      •
      Apache License 2.0
      •5•5•0•0•Updated Oct 24, 2024Oct 24, 2024

    • fence

      Public
      AuthN/AuthZ OIDC Service
      gen3
      Python
      •
      Apache License 2.0
      •48•38•3•73•Updated Oct 24, 2024Oct 24, 2024

    • cohort-middleware

      Public
      Middleware to work with Atlas cohorts in Gen3
      vadc
      Go
      •
      Apache License 2.0
      •1•0•0•5•Updated Oct 24, 2024Oct 24, 2024

    • gen3-code-vigil

      Public
      Gen3 Testing
      Python
      •
      Apache License 2.0
      •0•1•0•3•Updated Oct 24, 2024Oct 24, 2024

    • cdis-manifest

      Public
      Manifests tracking service versions to release to each environment
      HTML
      •
      Apache License 2.0
      •7•8•0•176•Updated Oct 24, 2024Oct 24, 2024

    • gen3-frontend-framework

      Public
      A Frontend Framework for Gen3 data portals
      TypeScript
      •
      Apache License 2.0
      •4•2•0•13•Updated Oct 24, 2024Oct 24, 2024

    • sower

      Public
      Job dispatcher for Kubernetes
      gen3
      Go
      •
      Apache License 2.0
      •1•4•0•3•Updated Oct 24, 2024Oct 24, 2024

    • cloud-automation

      Public
      Automation for standing up Gen3 commons
      gen3
      Shell
      •
      Apache License 2.0
      •67•41•99•71•Updated Oct 23, 2024Oct 23, 2024

    • heal-platform-sdk

      Public
      Python
      •
      Apache License 2.0
      •0•1•0•2•Updated Oct 23, 2024Oct 23, 2024

    • bih_dictionary

      Public
      The data dictionary for the MIDRC BDF Imaging Hub.
      Python
      •
      Apache License 2.0
      •2•1•0•0•Updated Oct 23, 2024Oct 23, 2024

    • peregrine

      Public
      GraphQL search API service
      gen3
      Python
      •
      Apache License 2.0
      •9•12•12•12•Updated Oct 23, 2024Oct 23, 2024

    • gen3sdk-python

      Public
      Gen3 SDK for Python
      gen3-lib
      Python
      •
      Apache License 2.0
      •21•12•3•16•Updated Oct 23, 2024Oct 23, 2024

    • argo-wrapper

      Public
      Wrapping Argo into nice API for VADC GWAS app
      vadc
      Python
      •
      Apache License 2.0
      •3•3•0•7•Updated Oct 23, 2024Oct 23, 2024

    • jupyter-superslim

      Public
      Super slim jupyter base image.
      Shell
      •
      Apache License 2.0
      •1•0•0•11•Updated Oct 23, 2024Oct 23, 2024

    • dictionaryutils

      Public
      python wrapper and metaschema for datadictionary
      gen3
      Python
      •
      Apache License 2.0
      •7•4•4•8•Updated Oct 23, 2024Oct 23, 2024

    • cdis-jenkins-lib

      Public
      Little groovy helper for Jenkins pipelines
      Groovy
      •
      Apache License 2.0
      •3•4•1•4•Updated Oct 23, 2024Oct 23, 2024

    • sheepdog

      Public
      API for herding data submissions
      gen3
      Python
      •
      Apache License 2.0
      •17•11•22•16•Updated Oct 22, 2024Oct 22, 2024

    • pypfb

      Public
      Python library & CLI to create, view and edit PFB files
      gen3-libgen3-pfbpfb
      Python
      •
      Apache License 2.0
      •9•9•0•14•Updated Oct 22, 2024Oct 22, 2024

    • dcf-dataservice

      Public
      Python
      •
      Apache License 2.0
      •0•0•0•24•Updated Oct 22, 2024Oct 22, 2024

    • indexd

      Public
      Index service server
      gen3
      Python
      •
      Apache License 2.0
      •20•21•24•20•Updated Oct 22, 2024Oct 22, 2024

    • gen3.org

      Public
      The website for gen3.org
      gen3
      HTML
      •
      Apache License 2.0
      •12•11•0•12•Updated Oct 22, 2024Oct 22, 2024

    • aws-es-proxy

      Public
      aws-es-proxy is a small web server application sitting between your HTTP client (browser, curl, etc...) and Amazon Elasticsearch service.
      Go
      •
      Apache License 2.0
      •202•1•0•13•Updated Oct 21, 2024Oct 21, 2024

    • bih-data-commons

      Public
      BIH Data Commons using Gen3.2
      TypeScript
      •
      Apache License 2.0
      •8•1•0•6•Updated Oct 21, 2024Oct 21, 2024

    • commons-frontend-app

      Public template
      Gen3 Data Commons template repository for gen3 frontend framework
      TypeScript
      •
      Apache License 2.0
      •8•3•0•9•Updated Oct 21, 2024Oct 21, 2024

    • vadc-mkdocs-staging

      Public
      VADC documentation - staging (not live documentation)
      HTML
      •
      Apache License 2.0
      •1•0•0•0•Updated Oct 21, 2024Oct 21, 2024

    • vadc-mkdocs

      Public
      VADC documentation
      HTML
      •
      Apache License 2.0
      •1•0•0•0•Updated Oct 21, 2024Oct 21, 2024

    • gen3-ui-component

      Public
      Base UI component in gen3
      JavaScript
      •
      Apache License 2.0
      •2•3•2•7•Updated Oct 21, 2024Oct 21, 2024

    • gen3authz

      Public
      gen3-lib
      Python
      •
      Apache License 2.0
      •4•1•0•2•Updated Oct 21, 2024Oct 21, 2024