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171 Open 198 Closed
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Issues list

Quantifying abundances: Segmentation fault on all kallisto versions above 0.48.0
#465 opened Oct 30, 2024 by CodingKaiser
4
Question about assigning gene names using t2g file
#464 opened Sep 30, 2024 by st4302
1
lr-kallisto quant-tcc seg fault with bulk ONT
#463 opened Sep 26, 2024 by sbresnahan
8
Kallisto Indexing runs but produces no data
#459 opened Sep 11, 2024 by arese001
1
related to: Illegal instruction error when running kallisto index
#454 opened Aug 5, 2024 by molly-hetheringtonrauth
7
Can Kallisto align nucleotide sequences to protein database for calculating CPM
#453 opened Aug 1, 2024 by xiaohong88999
1
Effect of Kmer size on quantification
#452 opened Jul 27, 2024 by Jayesh-Kumar-Sundaram
Distfile prefix changed for 0.51.0
#451 opened Jul 26, 2024 by outpaddling
2
lr-kallisto dorado unaligned bam files
#450 opened Jul 25, 2024 by MustafaElshani
6
Undocumented CPU Requirements?
#445 opened Jul 9, 2024 by aralbright
1
Using kb-python for mars-seq
#437 opened May 10, 2024 by sam-shariati
Question about kallisto indexes
#435 opened Apr 24, 2024 by st4302
3
kallisto gene vs transcript count
#434 opened Apr 15, 2024 by Rajesh-HKU
4
Facing issues while building on PPC64LE architecture.
#431 opened Apr 3, 2024 by vinodk99
10
Kallisto handling multiple reads from single transcript?
#428 opened Mar 5, 2024 by stromk
1
Kallisto for Parsebio
#427 opened Feb 28, 2024 by rootze
1
kallisto 0.50.1 fails with "Illegal instruction" when built on machines with AVX-512
#424 opened Feb 14, 2024 by stianlagstad
2
is it the 'clipped off poly-A tail' and 'clipped off poly-A tail' right?
#422 opened Jan 8, 2024 by Bianzh1024
1
Mapping kallisto equivalence classes to actual transcript sequences
#421 opened Dec 18, 2023 by rubenchazarra
8
kallisto quant 0.50.1 linux, illegal instruction
#420 opened Dec 14, 2023 by deborah-chasman
1
Kallisto total UMI difference between velocity and novelocity modes. (single cell)
#419 opened Dec 11, 2023 by mortunco
4
estimate read counts of a specific region of a transcript
#417 opened Nov 20, 2023 by zixuanxie
1
Change STORM-seq to uppper case for compatibility with kb_python
#415 opened Nov 13, 2023 by genomics-kl
A few minor patches for portability
#413 opened Nov 4, 2023 by outpaddling
kallisto 0.50.0 can't index
#411 opened Nov 2, 2023 by dariolez
14
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