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Missing 'audit' unit test(s) #127

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MattWellie opened this issue Oct 10, 2022 · 0 comments

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MattWellie commented Oct 10, 2022

https://github.com/populationgenomics/automated-interpretation-pipeline/blob/main/reanalysis/hail_filter_and_label.py#L43-L162

The methods used to assert that a MT with annotations is ready to continue through the annotation stages is itself missing validation.

This requires writing unit tests to confirm that the method is accurate, and fail modes are recognised appropriately

MattWellie self-assigned this

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