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@populationgenomics

Centre for Population Genomics

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  1. cpg-cost-control cpg-cost-control Public

    A Cloud Function to handle GCP billing budget notifications.

    Python 6 3

  2. production-pipelines production-pipelines Public

    Genomics workflows for CPG using Hail Batch

    Python 6 1

  3. talos talos Public

    Rare Disease variant reanalysis tool

    Python 6 4

  4. cuKING cuKING Public

    CUDA-based KING relatedness estimation

    Cuda 5

  5. seqr seqr Public

    Forked from broadinstitute/seqr

    web-based analysis tool for rare disease genomics

    Python 3 1

  6. cpg-infrastructure cpg-infrastructure Public

    This repository is used to manage the infrastructure at the CPG

    Python 3 1

Repositories

Showing 10 of 62 repositories
  • talos Public

    Rare Disease variant reanalysis tool

    populationgenomics/talos’s past year of commit activity
    Python 6 MIT 4 11 3 Updated Oct 31, 2024
  • analysis-runner Public
    populationgenomics/analysis-runner’s past year of commit activity
    Python 2 MIT 4 9 (2 issues need help) 7 Updated Oct 31, 2024
  • production-pipelines Public

    Genomics workflows for CPG using Hail Batch

    populationgenomics/production-pipelines’s past year of commit activity
    Python 6 MIT 1 40 38 Updated Oct 31, 2024
  • mocha-wgs Public Forked from Garvan-Data-Science-Platform/mocha-wgs

    A WDL workflow for running MoChA on WGS data

    populationgenomics/mocha-wgs’s past year of commit activity
    WDL 0 2 0 0 Updated Oct 31, 2024
  • sv-workflows Public

    Structural Variation Workflows

    populationgenomics/sv-workflows’s past year of commit activity
    Python 1 MIT 1 2 8 Updated Oct 30, 2024
  • cpg-flow Public

    CPG Pipeline Python API

    populationgenomics/cpg-flow’s past year of commit activity
    Makefile 0 MIT 0 0 2 Updated Oct 30, 2024
  • metamist Public

    Sample level metadata system

    populationgenomics/metamist’s past year of commit activity
    Python 1 MIT 1 41 23 Updated Oct 30, 2024
  • saige-tenk10k Public

    Hail batch pipeline to run SAIGE on CPG's GCP

    populationgenomics/saige-tenk10k’s past year of commit activity
    Python 0 MIT 0 5 1 Updated Oct 29, 2024
  • cpg-infrastructure Public

    This repository is used to manage the infrastructure at the CPG

    populationgenomics/cpg-infrastructure’s past year of commit activity
    Python 3 MIT 1 6 (1 issue needs help) 4 Updated Oct 25, 2024
  • images Public

    Reusable single-software docker images

    populationgenomics/images’s past year of commit activity
    Dockerfile 1 MIT 1 2 8 Updated Oct 25, 2024
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