Merge pull request #36 from potassco:WIP_conda-publish

Include Workflow to Publish to Conda

.github/conda.py

@@ -0,0 +1,83 @@
+#!/usr/bin/env python
+'''
+Simple script to call conda build with the current revision and version.
+'''
+
+import argparse
+import subprocess
+import json
+from re import match
+import os
+
+NAME = 'viasp'
+
+def get_build_number(channels, version):
+    '''
+    Get the next build number.
+    '''
+    try:
+        pkgs = json.loads(subprocess.check_output(['conda', 'search', '--json', '-c', channels[0], NAME]))
+    except subprocess.CalledProcessError:
+        pkgs = {NAME: []}
+
+
+    build_number = -1
+    for pkg in pkgs.get(NAME, []):
+        if pkg['channel'].find(channels[0]) >= 0 and pkg["version"] == version:
+            build_number = max(build_number, pkg['build_number'])
+
+    return build_number + 1
+
+def run():
+    '''
+    Compile and upload conda packages.
+    '''
+
+    parser = argparse.ArgumentParser(description='Build conda packages.')
+    parser.add_argument('--release', action='store_true', help='Build release packages.')
+    parser.add_argument('--package', type=str, help='Package to build. (frontend, backend, or viasp)', default='frontend')
+    args = parser.parse_args()
+    if args.release:
+        label = None
+        channels = ['potassco']
+    else:
+        label = "dev"
+        channels = ['potassco/label/dev', 'potassco']
+
+    path = 'viasp-dash'
+    if args.package == 'backend':
+        path = 'viasp-backend'
+        channels.extend(['conda-forge'])
+    elif args.package == 'viasp':
+        path = 'viasp'
+        channels.extend(['conda-forge', 'stephanzwicknagl/label/dev']) # change this to wherever the viasp-dash and viasp-backend are hosted
+
+    version = None
+    with open('setup.cfg') as fh:
+        for line in fh:
+            m = match(r'''[ ]*version[ ]*=[ ]*([0-9]+\.[0-9]+\.[0-9]+)(\.post[0-9]+)?''', line)
+            if m is not None:
+                version = m.group(1)
+    assert version is not None
+    build_number = get_build_number(channels, version)
+
+    build_env = os.environ.copy()
+    build_env.pop("BUILD_RELEASE", "1" if args.release else None)
+    build_env["VERSION_NUMBER"] = version
+    build_env["BUILD_NUMBER"] = str(build_number)
+    if 'GITHUB_SHA' in os.environ:
+        build_env["BUILD_REVISION"] = os.environ['GITHUB_SHA']
+
+    recipe_path = os.path.join(os.path.dirname(os.path.abspath(__file__)), 'conda', path)
+    options = ['conda', 'build']
+    if label is not None:
+        options.extend(['--label', label])
+
+    for c in channels:
+        options.extend(['-c', c])
+    options.append(recipe_path)
+
+    subprocess.check_call(options, env=build_env)
+
+if __name__ == '__main__':
+    run()

.github/conda/viasp-backend/meta.yaml

@@ -0,0 +1,48 @@
+{% set name = "viasp-backend" %}
+{% set version = environ.get('VERSION_NUMBER') %}
+{% set dev = not environ.get('BUILD_RELEASE', false) %}
+{% set revision = environ.get('GITHUB_SHA', 'wip') %}
+{% set build = environ.get('BUILD_NUMBER', "0") %}
+
+package:
+  name: {{ name|lower }}
+  version: {{ version }}
+
+source:
+  path: ../../../backend
+
+build:
+  noarch: python
+  script: python -m pip install --no-deps --ignore-installed .
+  number: {{ build }}
+  entry_points: 
+    ['viasp_server = viasp.__main__:backend',
+    'viasp = viasp.__main__:start']
+
+requirements:
+  host:
+    - python >=3.7
+    - setuptools >=42
+    - wheel
+    - pip
+  run:
+    - python >=3.7
+    - networkx >=2.4
+    - flask ==2.2.0
+    - werkzeug ==2.2.2
+    - clingo >=5.6.0
+    - flask-cors >=3.0
+    - requests >=2.26.0
+    - igraph >=0.8
+    - numpy
+    - clingraph
+
+about:
+  home: https://github.com/potassco/viasp
+  summary: The backend for the viasp package.
+  license: MIT
+  license_file: LICENCE.md
+
+extra:
+  recipe-maintainers:
+    - stephanzwicknagl

.github/conda/viasp-dash/meta.yaml

@@ -0,0 +1,39 @@
+{% set name = "viasp-dash" %}
+{% set version = "2.0.2" %}
+
+package:
+  name: {{ name|lower }}
+  version: {{ version }}
+
+source:
+  path: ../../../frontend
+
+build:
+  noarch: python
+  script: {{ PYTHON }} -m pip install . -vv --no-deps --no-build-isolation
+  number: 0
+
+requirements:
+  host:
+    - python
+    - pip
+  run:
+    - python
+    - dash >=2
+
+test:
+  imports:
+    - viasp_dash
+  commands:
+    - pip check
+  requires:
+    - pip
+
+about:
+  summary: The dash frontend for the viasp package.
+  license: MIT
+  license_file: LICENCE.md
+
+extra:
+  recipe-maintainers:
+    - stephanzwicknagl

.github/conda/viasp/meta.yaml

@@ -0,0 +1,44 @@
+{% set name = "viasp" %}
+{% set version = "2.0.2" %}
+
+package:
+  name: {{ name|lower }}
+  version: {{ version }}
+
+source:
+  path: ../../..
+
+build:
+  noarch: python
+  script: {{ PYTHON }} -m pip install . -vv --no-deps --no-build-isolation
+  number: {{ build }}
+
+requirements:
+  host:
+    - python >=3.7
+    - setuptools >=42
+    - wheel
+    - pip
+  run:
+    - python >=3.7
+    - viasp-backend
+    - viasp-dash
+    - jupyter-server-proxy
+    - clingraph
+    - python-graphviz
+
+test:
+  imports:
+    - viasp
+    - viasp_server
+
+about:
+
+  home: https://github.com/potassco/viasp
+  summary: a visualization tool for clingo.
+  license: MIT
+  license_file: LICENCE.md
+
+extra:
+  recipe-maintainers:
+    - stephanzwicknagl

.github/workflows/publish_conda.yml

@@ -0,0 +1,112 @@
+name: Deploy conda packages
+
+on:
+  workflow_dispatch:
+    inputs:
+      frontend:
+        type: boolean
+        required: true
+        description: Publish frontend of main HEAD
+      backend:
+        type: boolean
+        required: true
+        description: Publish backend of main HEAD
+
+jobs:
+  backend:
+    name: Publish backend
+    runs-on: ubuntu-latest
+
+    steps:
+    - name: Checkout repo
+      uses: actions/checkout@v4
+      with:
+        submodules: recursive
+
+    - name: setup miniconda
+      uses: conda-incubator/setup-miniconda@v3
+      with:
+        auto-update-conda: true
+        python-version: 3.11
+        activate-environment: build
+
+    - name: Install prerequisites
+      run: |
+        conda config --set anaconda_upload yes
+        conda install conda-build anaconda-client
+    - name: print info
+      shell: pwsh
+      run: |
+        conda info
+        conda list
+    - name: publish conda package backend
+      shell: pwsh
+      run: |
+        python .github/conda.py --package backend
+      env:
+        ANACONDA_API_TOKEN: ${{ secrets.ANACONDA_TOKEN }}
+
+  frontend:
+    name: Publish frontend
+    runs-on: ubuntu-latest
+    steps:
+    - name: Checkout repo
+      uses: actions/checkout@v4
+      with:
+        submodules: recursive
+
+    - name: setup miniconda
+      uses: conda-incubator/setup-miniconda@v3
+      with:
+        auto-update-conda: true
+        python-version: 3.11
+        activate-environment: build
+
+    - name: Install prerequisites
+      run: |
+        conda config --set anaconda_upload yes
+        conda install conda-build anaconda-client
+    - name: print info
+      shell: pwsh
+      run: |
+        conda info
+        conda list
+    - name: publish conda package frontend
+      shell: pwsh
+      run: |
+        python .github/conda.py --package frontend
+      env:
+        ANACONDA_API_TOKEN: ${{ secrets.ANACONDA_TOKEN }}
+
+  wrapper:
+    needs: [ frontend, backend ]
+    name: Publish container
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout repo
+        uses: actions/checkout@v4
+        with:
+          submodules: recursive
+
+      - name: setup miniconda
+        uses: conda-incubator/setup-miniconda@v3
+        with:
+          auto-update-conda: true
+          python-version: 3.11
+          activate-environment: build
+
+      - name: Install prerequisites
+        run: |
+          conda config --set anaconda_upload yes
+          conda install conda-build anaconda-client
+      - name: print info
+        shell: pwsh
+        run: |
+          conda info
+          conda list
+      - name: publish conda package wrapper
+        shell: pwsh
+        run: |
+          python .github/conda.py --package viasp
+        env:
+          ANACONDA_API_TOKEN: ${{ secrets.ANACONDA_TOKEN }}

backend/LICENCE.md

@@ -0,0 +1,21 @@
+MIT License
+
+Copyright (c) 2023 Luis Glaser, Stephan Zwicknagl
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.

backend/setup.cfg

@@ -23,7 +23,6 @@ install_requires =
     Werkzeug==2.2.2
     clingo>=5.6.0
     flask-cors>=3.0
-    clingox>=1.0.0
     requests>=2.26.0
     igraph>=0.8
     numpy

frontend/LICENCE.md

@@ -0,0 +1,21 @@
+MIT License
+
+Copyright (c) 2023 Luis Glaser, Stephan Zwicknagl
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.

requirements.txt

@@ -3,7 +3,6 @@ flask>=2.0,<=2.2.5
 Werkzeug==2.2.2
 networkx>=2.6
 pytest>=6.2.4
-clingox>=1.0.0
 requests
 dash
 flask-cors