DWI-Utilities

This repository contains functionality for apparent diffusion coefficient (ADC) map and computed high b-value diffusion-weighted (DWI) magnetic resonance image (MRI) generation.

Installation instructions

1. Clone/download repository.

2. Change directory into repository.

3. Install:

   pip install .
   

How to use it

• Function imports.

• Command line:

  • ADC map:

     adc_map --input_dir .\sample_data\0_sample_low_b_val_dwi --output_dir .\sample_data\1_output_adc_maps
    

  • Computed high b-value e.g. b2000:

     comp_high_b --input_dir .\sample_data\0_sample_low_b_val_dwi --target_bval 2000 --output_dir .\sample_data\1_output_cb2000_dwi