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23 Open 110 Closed
23 Open 110 Closed
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Issues list

tabulate-seqs reports the number of sequences in the input, not the number of rows in the table bug-sev:2|low bug-type:1|cosmetic UX is less than ideal; something is superficially wrong. diff:2|intermediate A modest understanding of the languages involved and platform is required. good first issue Good for newcomers
#316 opened Oct 3, 2024 by gregcaporaso
Table Summary should say "Number of Unique Features" good first issue Good for newcomers
#313 opened Jul 24, 2024 by cherman2
@hagenjp
1
ENH: Adding new action to normalize FeatureTable[Frequency]
#311 opened Jul 19, 2024 by VinzentRisch
@ebolyen
qiime feature-table rarefy --p-with-replacement: sum(pvals[:-1]) > 1.0
#245 opened Mar 9, 2021 by nick-youngblut
1
7
Allow table grouping across multiple semantic table types
#241 opened Dec 15, 2020 by jwdebelius
Upgrade Summarize Plots to Vega 5
#229 opened Jun 2, 2020 by Oddant1
heatmap: return sorted feature table
#228 opened Apr 15, 2020 by nbokulich
Summarize visualizer breaks on columnless metadata
#227 opened Apr 1, 2020 by thermokarst
1
Sort number-like categories in numerical order bug-sev:1|negligible bug-type:1|cosmetic UX is less than ideal; something is superficially wrong. scope:0|this-project No other repositories are impacted. src:self From the original poster. type:improvement Making something better.
#214 opened Jun 11, 2019 by ChrisKeefe
1
new method: split fasta
#205 opened Mar 6, 2019 by nbokulich
ENH: subsample: stratify by metadata column(s)
#204 opened Feb 20, 2019 by nbokulich
group: add option to ignore missing samples
#198 opened Dec 29, 2018 by nbokulich
summarize should include average frequency per metadata category value
#197 opened Dec 6, 2018 by gregcaporaso
feature-table group should generate new metadata
#194 opened Nov 30, 2018 by antgonza
@hagenjp
BUG: tsorter fails to sort sequence BLAST links
#189 opened Sep 28, 2018 by ChrisKeefe
Warn if filter-samples returns empty table
#179 opened Jun 20, 2018 by nbokulich
2
function request: per sample filtering
#177 opened Apr 26, 2018 by qiyunzhu
1
summarize: show metadata labels associated with samples in interactive plot
#170 opened Apr 6, 2018 by ebolyen
heatmap: "image size too large" error type:bug Something is wrong.
#155 opened Nov 15, 2017 by thermokarst
3
BIOM 2.1.6 refactors
#149 opened Oct 11, 2017 by wasade
3 tasks done
1
@gregcaporaso
3
FeatureData[Taxonomy] discrepancies between Python and CLI enhancement question
#136 opened Sep 2, 2017 by ElDeveloper
6
Split _summarize subpackage good first issue Good for newcomers
#131 opened Aug 24, 2017 by thermokarst
1
add option for seeding rarefaction?
#55 opened Nov 9, 2016 by gregcaporaso
6
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