RNA-seq Tutorial

This repo will contain a practice-based tutorial on analyzing RNA-seq data using edgeR.

Pre-requisites

The following packages are essential for using this tutorial:

• R
• edgeR

Optional

I recommend using Jupyter for your code, because of the ease of integrating documentation with code, and the easy visualization of data. Instructions for installing Jupyter can be found here and instructions on using R with jupyter can be found here.

Note that you do not need jupyter to follow along. If you don't have it, copy the code from the notebooks in this repo into R studio or whatever other environment you run R commands in.