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Update src/scirpy/ir_dist/metrics.py
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Co-authored-by: Gregor Sturm <mail@gregor-sturm.de>
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tobgan and grst authored Nov 16, 2023
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2 changes: 1 addition & 1 deletion src/scirpy/ir_dist/metrics.py
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Expand Up @@ -519,7 +519,7 @@ class FastAlignmentDistanceCalculator(ParallelDistanceCalculator):
The choice of an expected penalty is likely influenced by similar considerations as the
other parameters. Essentially, this can be thought of as a superficial (dis)similarity
measure. A higher value more strongly penalizes mismatching characters and is more in line
with looking for closely related sequence paris, while a lower value is more forgiving
with looking for closely related sequence pairs, while a lower value is more forgiving
and better suited when looking for more distantly related sequence pairs.
Parameters
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