Skip to content
View simang5c's full-sized avatar
🎯
Focusing
🎯
Focusing

Block or report simang5c

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Please don't include any personal information such as legal names or email addresses. Maximum 100 characters, markdown supported. This note will be visible to only you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
simang5c/README.md

About Me πŸ‘‹

  • πŸ‘‹ Hi, I’m Dr. Simang Champramary
  • πŸ‘€ I’m interested in Bioinformatics
  • πŸ“« simang5c@gmail.com

Research Interests

  • Transcriptomics, Meta-transcriptomics, metagenomics
  • Computational Tool Development for NGS

Technical Skills

  • Languages: Python, R
  • Tools: Scanpy, ScvI, Seurat and more
  • Pipeline Development: Have experience with Snakemake but Learning Nextflow
  • HPC: Experience with cluster computing

Popular repositories Loading

  1. convert-multiline-fasta-to-single-line-fasta convert-multiline-fasta-to-single-line-fasta Public

    This python program converts multi line fasta file to single line fasta without loading all sequences to the memory

    Python 1

  2. create_smaller_fasta_files_from_large_fasta create_smaller_fasta_files_from_large_fasta Public

    Python

  3. automating_BIGPI_Fungal automating_BIGPI_Fungal Public

    This is Selenium based web-scraping for automating sequence submission to BigPI-Fungal and saving results

    Python

  4. simang5c simang5c Public

    Config files for my GitHub profile.

  5. star_alignment_and_rsem_automation star_alignment_and_rsem_automation Public

    This is a simple program to automate star alignment and quantification using RSEM

    Python

  6. outcyte_automation.py outcyte_automation.py Public

    Python