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UW Sauro Lab

35 followers
Seattle
https://www.sys-bio.org
hsauro@u.washington.edu

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tellurium tellurium Public

Python Environment for Modeling and Simulating Biological Systems

Python 144 41
roadrunner roadrunner Public

Forked from AndySomogyi/sbmlsolver

libRoadRunner: A high-performance SBML simulator

C++ 62 31

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Showing 10 of 120 repositories

libantimonyjs Public
JavaScript version of the antimony library to support human-readable, human-writable modular model definition language.

sys-bio/libantimonyjs's past year of commit activity

JavaScript 1 1 2 0 Updated Aug 29, 2026
libroadrunner-deps Public
Dependencies for libroadrunner

sys-bio/libroadrunner-deps's past year of commit activity

CMake 3 5 0 0 Updated Aug 29, 2026
SBMLNetwork Public Forked from adelhpour/SBMLNetwork
SBMLNetwork is a library designed to enable software developers and systems biologists to interact with the graphical representation of SBML (Systems Biology Markup Language) models.

sys-bio/SBMLNetwork's past year of commit activity

C++ 6 MIT 1 10 0 Updated Aug 29, 2026
roadrunner Public Forked from AndySomogyi/sbmlsolver
libRoadRunner: A high-performance SBML simulator

sys-bio/roadrunner's past year of commit activity

C++ 62 39 77 (1 issue needs help) 2 Updated Aug 29, 2026
tellurium Public
Python Environment for Modeling and Simulating Biological Systems

sys-bio/tellurium's past year of commit activity

Python 144 Apache-2.0 41 129 4 Updated Aug 29, 2026
AAAIM Public

sys-bio/AAAIM's past year of commit activity

Jupyter Notebook 2 MIT 3 0 1 Updated Aug 28, 2026
antimony Public

sys-bio/antimony's past year of commit activity

C++ 22 BSD-3-Clause 4 4 0 Updated Aug 28, 2026
makesbml Public
Simple site to convert antimony to sbml

sys-bio/makesbml's past year of commit activity

JavaScript 1 Apache-2.0 1 1 1 Updated Aug 26, 2026
IridiumSimulator Public
Interactive desktop simulator for systems biology

sys-bio/IridiumSimulator's past year of commit activity

Pascal 4 MIT 3 0 0 Updated Aug 24, 2026
vscode-antimony Public
Extensions for Antimony development in Visual Studio Code.

sys-bio/vscode-antimony's past year of commit activity

Python 3 MIT 0 43 3 Updated Aug 19, 2026

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