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1. cpgdirection cpgdirection Public

   Predict the direction of a CpG's effect on gene expression. Four evidence layers — measured eQTMs, summary-data Mendelian randomisation, per-tissue gradient-boosted models, and a distance prior — o…

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2. dmsa dmsa Public

   Directional Methylation Set Analysis — aligns probe-level DNA methylation effects to their predicted consequence for gene expression before aggregation, and names the responsible gene inside level-…

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3. cpgdirectionData cpgdirectionData Public

   ExperimentHub data package serving the cpgdirection layers: tissue eQTM lookup tables, SMR causal directions, EPIC v2 probe positions, brain directions, saliva bridge scores, and the multi-source E…

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