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@theLongLab

The Long Lab

Software from Dr. Quan Long's research group at the University of Calgary

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  1. CATE CATE Public

    A fast and scalable CUDA implementation to conduct highly parallelized evolutionary tests on large scale genomic data.

    Cuda 11

  2. TF-TWAS TF-TWAS Public

    R 6 1

  3. PoolHapX PoolHapX Public

    PoolHapX

    Java 5 1

  4. kTWAS kTWAS Public

    Java 5 2

  5. Jawamix5 Jawamix5 Public

    Java 4 1

  6. TransCOVID TransCOVID Public

    A dedicated pipeline designed for the inference of COVID19 transmission networks in a population complete with the prediction of unsampled sources of infection using SARS-CoV-2 genomic sequences. O…

    R 4

Repositories

Showing 10 of 28 repositories
  • CATE Public

    A fast and scalable CUDA implementation to conduct highly parallelized evolutionary tests on large scale genomic data.

    theLongLab/CATE’s past year of commit activity
    Cuda 11 MIT 0 0 0 Updated Oct 26, 2024
  • transTF-TWAS Public
    theLongLab/transTF-TWAS’s past year of commit activity
    Python 3 GPL-3.0 0 0 0 Updated Oct 17, 2024
  • Apollo Public

    A comprehensive simulator for exploring the dynamics of viral transmission complete with within host evolution.

    theLongLab/Apollo’s past year of commit activity
    Cuda 1 MIT 0 0 0 Updated Oct 14, 2024
  • Transfer-Learning Public
    theLongLab/Transfer-Learning’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Sep 19, 2024
  • AE-TWAS Public
    theLongLab/AE-TWAS’s past year of commit activity
    Python 3 0 0 0 Updated Sep 19, 2024
  • Jawamix5 Public
    theLongLab/Jawamix5’s past year of commit activity
    Java 4 1 0 1 Updated Sep 17, 2024
  • Kernel_smoothed_permutation Public

    Kernel-smoothed permutation is a method that constructs the null distribution of a test statistic through a novel kurtosis-driven Box-Cox transformation, followed by a kernel- based density estimation (KDE).

    theLongLab/Kernel_smoothed_permutation’s past year of commit activity
    R 0 MIT 0 0 0 Updated Dec 27, 2023
  • TF-TWAS Public
    theLongLab/TF-TWAS’s past year of commit activity
    R 6 GPL-3.0 1 1 0 Updated Oct 13, 2023
  • IMAS Public
    theLongLab/IMAS’s past year of commit activity
    R 0 0 0 0 Updated Sep 15, 2023
  • Proteomics Public
    theLongLab/Proteomics’s past year of commit activity
    0 MIT 0 0 0 Updated Sep 14, 2023
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