Material for a workshop on Bayesian analysis of capture-recapture data with hidden Markov models and Nimble

R package to perform goodness-of-fit tests for capture-recapture models (and various manipulations)

This repository holds the source materials used for a working group/symposium on capture-recapture models and social networks, and an introduction to capture-recapture models in nimble to estimate demographic parameters.

Himes Boor, G.K., T.L. McGuire, A.J. Warlick, R.L. Taylor, S.J. Converse, J.R. McClung, A.D. Stephens. 2022. Estimating reproductive rates and juvenile survival when offspring ages are uncertain: a novel multievent mark-recapture model applied to an endangered beluga whale population. Methods in Ecology and Evolution

Estimate abundance using capture-recapture models

Illustrate how to simulate data with Jags