maftools

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R data package for pre-compiled somatic mutations from TCGA cohorts and CCLE

somatic-variants mutations maf tcga-data ccle maftools

GenomeSpy-based mutation plots for R

Somatic mutation landscape analysis of TCGA-LUAD using Python and R, inspired by Dietlein et al. 2020

python bioinformatics r tcga cancer-genomics somatic-mutations maftools

maftools for SNV mutation analysis, summarizes, and visualization

mutation snv maftools

Variant calling com Mutect2, PON, BQSR e analise maftools

bioinformatics r gatk cancer-genomics variant-calling mutect2 maftools

CAYA Analysis

Somatic mutations in TCGA lung adenocarcinoma — maftools workflow

bioinformatics r driver-genes tcga cancer-genomics somatic-mutations tcgabiolinks tcga-data bioinformatics-tool maftools egfr kras nsclc oncoplot lung-adenocarcinoma

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