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tmt-data-analyses

Here are 5 public repositories matching this topic...

pwilmart / TMT_analysis_examples

Examples of TMT data analyses using R. Links to notebooks and repositories. Also a few spectral counting analyses.

r jupyter-notebook ipynb proteomics mass-spectrometry proteomics-data tmt tmt-data-analyses

Updated May 27, 2022

pwilmart / IRS_validation

Analysis of technical replicate channels to more fully validate the internal reference scaling (IRS) method.

r jupyter-notebook irs ipynb proteomics normalization irs-normalization tmt tmt-data-analyses

Updated May 27, 2022
Jupyter Notebook

pwilmart / BCP-ALL_QE-TMT_Nat-Comm-2019

Re-analysis of data from childhood acute lymphoblastic leukemia study in Nat. Comm. April 2019

r jupyter-notebook proteomics irs-normalization tmt tmt-data-analyses paw-pipeline

Updated Apr 11, 2019
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pwilmart / Yeast_CarbonSources

Yeast TMT data - 3 different carbon sources (from Gygi lab) analyzed with PAW pipeline and MaxQuant

r jupyter-notebook proteomics tmt tmt-data-analyses paw-pipeline statistical-testing

Updated Mar 27, 2023
Jupyter Notebook

pwilmart / Dilution_series

Tandem Mass Tag (TMT) dilution series analysis

r jupyter-notebook proteomics tmt tmt-data-analyses paw-pipeline

Updated Mar 27, 2019
Jupyter Notebook

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