velvet-assembler

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Sarah-Hesham-2022 / De-Bruijn-Graph-Chain-Merging-Compacting

Data Analysis for Genomics, De Bruijn Graph Chain Merging Compacting.

python bioinformatics programming genomics data-analysis biological-data-analysis problem-solving genome-assembly de-bruijn-graphs dna-sequences euler-path velvet-noise merging-chains read-off-contigs biological-sequential-analysis velvet-assembler

Updated Aug 26, 2023
Python

mansikath / whole-genome-sequencing-pipeline

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A comprehensive workflow for de novo assembly of whole-genome shotgun sequencing data using Velvet, followed by BLAST searches to analyze assembled contigs.

bioinformatics genomics sequencer ngs bioinformatics-pipeline blast next wgs whole-genome-sequencing denovo-assembly contigs ngs-analysis ngs-pipeline bioinformatics-tool blastp genomics-data trimmomatic velvet-assembler

Updated Nov 26, 2023
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