Self-contained WDL workflow that converts a WGS FASTQ file into an unmapped CRAM file
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Updated
Jul 8, 2024 - WDL
Self-contained WDL workflow that converts a WGS FASTQ file into an unmapped CRAM file
A demo repo to help folks run Star on RNA seq data and do DEseq2
Workflow to download paired fastqs from SRA and pass through STAR 2 pass
A repo containing workflows written in WDL to test using the Fred Hutch Cromwell configuration.
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