Update Land DA container to Spack-Stack 1.6.0

[EdwardSnyder-NOAA]

Description

This PR updates or adds files to support updating the Land DA container to spack-stack 1.6.0. Major changes include adding modulefile task files for singularity, added a singularity land_analysis file, and document changes.

The Land DA container was built with this PR using this landda dockerfile which inherits this spack-stack dockerfile. Testing was done with this container using the land_analysis test described in the docs which passed on GCP, AWS, and Hercules.

UPDATE:
The latest Land DA container was built with the updated wm hash, which required updates to the landda dockerfile and spack-stack dockerfile. Here is the setup_container.sh script that is used in this process. Lastly, the ctest Dockerfile was tested with our Jenkins pipeline and passes without any problems.

Anticipated changes to regression tests:

• Is baseline change expected ?

Subcomponents involved:

• apply_incr.fd (NOAA-PSL/land-apply_jedi_incr)
• ufs_model.fd (ufs-community/ufs-weather-model)
• none

Linked PR's and Issues:

Testing (for CM's):

• RDHPCS
  • Hera
  • Orion
  • Hercules
• CI
  • Completed
• WE2E
  • Completed
• PW-Clouds
  • AWS
  • AZURE
  • GCP

[jkbk2004]

@EdwardSnyder-NOAA do you think we need to update https://github.com/EdwardSnyder-NOAA/land-DA_workflow/blob/ss160-container-update/sorc/test/ci/Dockerfile ?

[EdwardSnyder-NOAA]

Yes, @jkbk2004 I'll need to update that file. I got it to work but had to make a number of changes that I think could be resolved in a more elegant way. I'll try to get those changes in today.

Just a reminder this PR is for the previous ufs model hash. I'm still working on building the spack-stack with the proper modules to support the new ufs model hash.

[EdwardSnyder-NOAA]

The container has been updated to work with the new ufs wm hash. All the scripts are in order and it runs successfully on AWS (/contrib/Edward.Snyder/landda-container/aug-update/wm-hash-update/updated/land-DA_workflow):

[Edward.Snyder@aws-202 parm]$ rocotostat -w land_analysis.xml -d land_analysis.db
       CYCLE                    TASK                       JOBID               STATE         EXIT STATUS     TRIES      DURATION
================================================================================================================================
200001030000                prep_obs                          54           SUCCEEDED                   0         1           9.0
200001030000                pre_anal                          55           SUCCEEDED                   0         1          17.0
200001030000                analysis                          57           SUCCEEDED                   0         1          26.0
200001030000               post_anal                          58           SUCCEEDED                   0         1           9.0
200001030000                forecast                          59           SUCCEEDED                   0         1          40.0
200001030000              plot_stats                          60           SUCCEEDED                   0         1          59.0
================================================================================================================================
200001040000                prep_obs                          56           SUCCEEDED                   0         1           9.0
200001040000                pre_anal                          61           SUCCEEDED                   0         1           8.0
200001040000                analysis                          62           SUCCEEDED                   0         1          19.0
200001040000               post_anal                          63           SUCCEEDED                   0         1           8.0
200001040000                forecast                          64           SUCCEEDED                   0         1          38.0
200001040000              plot_stats                          65           SUCCEEDED                   0         1          25.0

The ctest Dockerfile also works, which was tested with our Jenkins pipeline:

#13 57.04 100% tests passed, 0 tests failed out of 4
#13 57.04 
#13 57.04 Total Test time (real) =  55.52 sec
#13 DONE 70.2s`