Merge pull request #2178 from usegalaxy-au/cat-bro-patch-26

singularity for requested tools
usegalaxy-au · Sep 17, 2024 · dad14c5 · dad14c5
2 parents 29bd293 + 8f52a49
commit dad14c5
Showing 1 changed file with 9 additions and 0 deletions.
diff --git a/files/galaxy/dynamic_job_rules/production/total_perspective_vortex/tools.yml b/files/galaxy/dynamic_job_rules/production/total_perspective_vortex/tools.yml
@@ -1261,6 +1261,9 @@ tools:
   toolshed.g2.bx.psu.edu/repos/iuc/arriba_get_filters/arriba_get_filters/.*:
     params:
       singularity_enabled: true
+  toolshed.g2.bx.psu.edu/repos/iuc/artic.*:
+    params:
+      singularity_enabled: true
   toolshed.g2.bx.psu.edu/repos/iuc/bakta/bakta/.*:
     context:
       max_concurrent_job_count_for_tool_user: 2
@@ -2600,6 +2603,9 @@ tools:
   toolshed.g2.bx.psu.edu/repos/iuc/sceasy_convert/sceasy_convert/.*:
     params:
       singularity_enabled: true
+  toolshed.g2.bx.psu.edu/repos/iuc/seq2hla/seq2hla/.*:
+    params:
+      singularity_enabled: true
   toolshed.g2.bx.psu.edu/repos/iuc/schicexplorer_.*:
     params:
       singularity_enabled: true
@@ -3561,6 +3567,9 @@ tools:
     mem: 11.5
     params:
       singularity_enabled: true
+  toolshed.g2.bx.psu.edu/repos/iuc/optitype/optitype/.*:
+    params:
+      singularity_enabled: true
   toolshed.g2.bx.psu.edu/repos/iuc/orthofinder_onlygroups/orthofinder_onlygroups/.*:
     context:
       max_concurrent_job_count_for_tool_user: 2