Updated for the February release #32
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| name: Validate FDP and Deploy | |
| on: | |
| workflow_dispatch: | |
| push: | |
| paths: | |
| - '**/index.html' | |
| pull_request: | |
| # Sets permissions of the GITHUB_TOKEN to allow deployment to GitHub Pages | |
| permissions: | |
| contents: write | |
| pages: write | |
| id-token: write | |
| jobs: | |
| validate-rdf: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| submodules: true | |
| fetch-depth: 0 | |
| - name: Safe files as .ttl | |
| run: | | |
| cp index.html index.ttl | |
| cp catalog/index.html catalog/index.ttl | |
| cp dataset/20230210/index.html dataset/20230210/index.ttl | |
| - name: Validate FDP | |
| uses: vemonet/jena-riot-action@v3.14 | |
| with: | |
| input: index.ttl | |
| - name: Validate Catalog | |
| uses: vemonet/jena-riot-action@v3.14 | |
| with: | |
| input: catalog/index.ttl | |
| - name: Validate Datasets | |
| uses: vemonet/jena-riot-action@v3.14 | |
| with: | |
| input: dataset/20230210/index.ttl | |
| - name: ShEx validation | |
| run: | | |
| sudo apt install groovy | |
| groovy validate.groovy resource.shex http://fairdatapoint.org/ResourceShape index.html http://purl.org/fdp/fdp-o#FairDataPoint | |
| groovy validate.groovy catalog.shex http://fairdatapoint.org/CatalogShape index.html http://www.w3.org/ns/dcat#Catalog | |
| groovy validate.groovy catalog.shex http://fairdatapoint.org/CatalogShape catalog/index.html http://www.w3.org/ns/dcat#Catalog | |
| # Build Jeckyll Website job | |
| build: | |
| runs-on: ubuntu-latest | |
| needs: validate-rdf | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v3 | |
| with: | |
| ref: main | |
| - name: Setup Pages | |
| uses: actions/configure-pages@v3 | |
| - name: Build with Jekyll | |
| uses: actions/jekyll-build-pages@v1 | |
| with: | |
| source: . | |
| destination: ./_site | |
| - name: Upload artifact | |
| uses: actions/upload-pages-artifact@v1 | |
| # Jeckyll Website Deployment job | |
| deploy: | |
| environment: | |
| name: github-pages | |
| url: ${{ steps.deployment.outputs.page_url }} | |
| runs-on: ubuntu-latest | |
| needs: build | |
| steps: | |
| - name: Deploy to GitHub Pages | |
| id: deployment | |
| uses: actions/deploy-pages@v2 | |
| ping: | |
| runs-on: ubuntu-latest | |
| needs: deploy | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| submodules: true | |
| fetch-depth: 0 | |
| - name: Install python | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: '3.10' | |
| - name: Install Python dependency | |
| uses: py-actions/py-dependency-install@v4 | |
| with: | |
| path: "script/requirements.txt" | |
| - name: Ping FDP index | |
| id: ping-index | |
| working-directory: ./script | |
| env: | |
| FDP_INDEX_URL: "https://index.vp.ejprarediseases.org/" | |
| FDP_URL: "https://fdp.wikipathways.org/" | |
| run: 'python ping.py' |