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x-rune-x/README.md

Hello, my name is James Bedford.

I enjoy coding bioinformatics problems from the website Rosalind along with other random projects.

I typically work with Python for bioinformatics along with a sprinkling of C#. More recently I've been working on web development with Vue.

Feel free to have a look through my random assortment of code.

A small webapp I created with Vue to help learn Japanese words can be found hosted on Firebase at https://nihongo-words-31664.web.app

My personal blog site I created can be found at www.snowchron.com

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  1. rosalind_catalan rosalind_catalan Public

    Provides the number of non-crossing pairings between nucleotides in an RNA string

    Python

  2. rosalind_increasing_subsequence rosalind_increasing_subsequence Public

    Finds a longest increasing and decreasing subsequence for a randomly ordered permutation up to 10000.

    Python

  3. rosalind_shared_DNA_motif rosalind_shared_DNA_motif Public

    Finds the longest common substring shared by a list of DNA sequences.

    Python

  4. rosalind_ORF rosalind_ORF Public

    Finds all possible proteins coded by a DNA sequence.

    Python 1

  5. lexigraphic_k-mers lexigraphic_k-mers Public

    Takes a group of characters and provides all possible strings of a required length that can be built using the characters, including repetition.

    Python

  6. rosalind_protein_motif rosalind_protein_motif Public

    Finds position of N-glycosylation motifs in proteins.

    Python