update

xiaoli-dong · Jan 19, 2024 · 23cb2a7 · 23cb2a7
1 parent 2f22695
commit 23cb2a7
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Showing 4 changed files with 1 addition and 104 deletions.
diff --git a/modules/local/shovill/main.nf b/modules/local/shovill/main.nf
@@ -12,7 +12,7 @@ process SHOVILL {
 
     output:
     tuple val(meta), path("*contigs.fa.gz")                         , emit: contigs
-    tuple val(meta), path("shovill.corrections")                , emit: corrections
+    tuple val(meta), path("shovill.corrections")                , optional: true, emit: corrections
     tuple val(meta), path("shovill.log")                        , emit: log
     tuple val(meta), path("{skesa,spades,megahit,velvet}.fasta"), emit: raw_contigs
     tuple val(meta), path("*contigs.{fastg,gfa,LastGraph}.gz")      , optional:true, emit: gfa

diff --git a/modules/nf-core/shovill/environment.yml b/modules/nf-core/shovill/environment.yml
diff --git a/modules/nf-core/shovill/main.nf b/modules/nf-core/shovill/main.nf
diff --git a/modules/nf-core/shovill/meta.yml b/modules/nf-core/shovill/meta.yml