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Using --usefiltered-truth results in incorrect FP calls for filtered variants in the truth (xcmp)
#191
opened Jul 24, 2024 by
melferink
[E::bgzf_uncompress] inflate failed: invalid distance too far back
#185
opened Dec 13, 2023 by
liukeweiaway
VCF format issues with --write-vcf, - FORMAT field inconsistencies
#175
opened Apr 18, 2023 by
insilicool
Parsing results VCF gives different counts of TRUTH FN than summary
#170
opened Jan 24, 2023 by
BrianLohman
pre.py -> vcfcheck fails due to call with invalid genotype (non-existent allele)
#169
opened Dec 4, 2022 by
robertzeibich
Confused with the interpretation when having TRUTH.FN and QUERY.FP
#168
opened Nov 10, 2022 by
Manuel-DominguezCBG
TRUTH.TOTAL differs despite having used the same TRUTH SET
#165
opened Oct 20, 2022 by
robertzeibich
problems about default and customized ref.fasta in variant normalisation process
#159
opened May 23, 2022 by
YuanfengZhang
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