Bug fix custom panels KeyError: ncbi_names_json (#185)

Mykrobe-tools · May 22, 2024 · 68e0914 · 68e0914
1 parent e51db6a
commit 68e0914
Showing 1 changed file with 1 addition and 0 deletions.
diff --git a/src/mykrobe/cmds/amr.py b/src/mykrobe/cmds/amr.py
@@ -153,6 +153,7 @@ def ref_data_from_args(args):
             "var_to_res_json": args.custom_variant_to_resistance_json,
             "hierarchy_json": None,
             "lineage_json": args.custom_lineage_json,
+            "ncbi_names_json": None,
             "kmer": args.kmer,
             "version": "custom",
             "species_phylo_group": None,