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listmode DL notebooks for PSMR 2024 #225

Merged
merged 55 commits into from
May 16, 2024
Merged

listmode DL notebooks for PSMR 2024 #225

merged 55 commits into from
May 16, 2024

Commits on May 1, 2024

  1. init commit of first LM DL PET notebooks

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    gschramm committed May 1, 2024
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  2. rename notebook

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    gschramm committed May 1, 2024
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  3. ignore all notebooks (auto generated from jupytext)

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    gschramm committed May 1, 2024
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  4. update README

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    gschramm committed May 1, 2024
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  5. add notebook file and learning objectives

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    gschramm committed May 1, 2024
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Commits on May 3, 2024

  1. add sirf wsl build help

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    gschramm committed May 3, 2024
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  2. update help

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    gschramm committed May 3, 2024
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  3. add first figure

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    gschramm committed May 3, 2024
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Commits on May 5, 2024

  1. work on intro

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    gschramm committed May 5, 2024
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  2. work on intro

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    gschramm committed May 5, 2024
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  3. work on intro

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    gschramm committed May 5, 2024
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Commits on May 6, 2024

  1. move solution into separate file

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    gschramm committed May 6, 2024
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  2. add array notebook

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    gschramm committed May 6, 2024
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Commits on May 8, 2024

  1. add LM recon mini example

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    gschramm committed May 8, 2024
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  2. notebooks/Deep_Learning_listmode_PET/01_SIRF_listmode_recon.py

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    gschramm committed May 8, 2024
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Commits on May 9, 2024

  1. work on LM recon notebook

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    gschramm committed May 9, 2024
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  2. format notebook

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    gschramm committed May 9, 2024
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  3. move solutions to snippets

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    gschramm committed May 9, 2024
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  4. use inverse sens images in updates

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    gschramm committed May 9, 2024
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  5. correct LM OSEM solution

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    gschramm committed May 9, 2024
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Commits on May 12, 2024

  1. add test script for hessian in sinogram mode

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    gschramm committed May 12, 2024
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  2. cosmetics

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    gschramm committed May 12, 2024
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Commits on May 13, 2024

  1. add manual Hessian test

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    gschramm committed May 13, 2024
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  2. add LM Hessian test

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    gschramm committed May 13, 2024
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  3. use acq storage memory

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    gschramm committed May 13, 2024
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  4. add skeleton for 3rd notebook

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    gschramm committed May 13, 2024
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  5. work on 3rd notebook

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    gschramm committed May 13, 2024
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Commits on May 14, 2024

  1. work on 3rd notebook

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    gschramm committed May 14, 2024
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  2. add custom layer notebook

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    gschramm committed May 14, 2024
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  3. structure notebooks

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    gschramm committed May 14, 2024
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  4. structure notebooks

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    gschramm committed May 14, 2024
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  5. work on notebook 4

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    gschramm committed May 14, 2024
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Commits on May 15, 2024

  1. add 04/05 notebooks

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    gschramm committed May 15, 2024
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  2. WIP

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    gschramm committed May 15, 2024
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  3. add TODO

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    gschramm committed May 15, 2024
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  4. add new figures

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    gschramm committed May 15, 2024
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  5. Merge branch 'LM_DL_notebooks' of github.com:gschramm/SIRF-Exercises … 

    …into LM_DL_notebooks
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    gschramm committed May 15, 2024
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  6. add new figure

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    gschramm committed May 15, 2024
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  7. wip

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    gschramm committed May 15, 2024
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  8. Merge branch 'LM_DL_notebooks' of git@github.com:gschramm/SIRF-Exerci… 

    …ses.git into LM_DL_notebooks
    @gschramm
    gschramm committed May 15, 2024
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  9. update plots

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    gschramm committed May 15, 2024
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  10. black reformat

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    gschramm committed May 15, 2024
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  11. update figure

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    gschramm committed May 15, 2024
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  12. clean up

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    gschramm committed May 15, 2024
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  13. clean up

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    gschramm committed May 15, 2024
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  14. clean up

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    gschramm committed May 15, 2024
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  15. update TODO

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    gschramm committed May 15, 2024
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Commits on May 16, 2024

  1. WIP to get 60min recons

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    gschramm committed May 16, 2024
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  2. use 60min ref recon

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    gschramm committed May 16, 2024
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  3. Merge branch 'LM_DL_notebooks' of git@github.com:gschramm/SIRF-Exerci… 

    …ses.git into LM_DL_notebooks

# Conflicts:
#	notebooks/Deep_Learning_listmode_PET/TODO.txt
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    gschramm committed May 16, 2024
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  4. clean up

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    gschramm committed May 16, 2024
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  5. clean up

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    gschramm committed May 16, 2024
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  6. reformat

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    gschramm committed May 16, 2024
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  7. add ipynb versions

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    gschramm committed May 16, 2024
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  8. fix typos

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    gschramm committed May 16, 2024
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