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25 Open 53 Closed
25 Open 53 Closed
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Issues list

Can this tool provide multiple matching results instead of just the best result?
#83 opened Oct 25, 2024 by Solaughing
question
#82 opened Oct 25, 2024 by Solaughing
Recommended options for SCOP40 test
#81 opened Jul 31, 2024 by rcedgar
1
cath-resolve-hits.macos-10
#80 opened Jan 3, 2024 by bioinfo2016
Can I use a CATH online server scan multiple data (pdb.) a one time
#79 opened Mar 3, 2023 by yang-nei
Scoring Output
#77 opened Sep 17, 2022 by Newlcg
cath.superpose ssaps files optimization ?
#76 opened Aug 22, 2021 by tubiana
@tonyelewis
1
Create software for structural scans (eg CATHEDRAL)
#72 opened Jan 8, 2020 by sillitoe
Can cath-resolve-hits be used to merge InterProScan results?
#70 opened Apr 9, 2019 by xunsheng
2
Add --pdb-infile option to cath-ssap and use it in --do-the-ssaps enhancement
#53 opened Dec 3, 2017 by tonyelewis
@tonyelewis
Improve docs,tests etc of handling of residues that don't have a backbone complete enhancement
#51 opened Dec 2, 2017 by tonyelewis
@tonyelewis
Some cath-ssaps that work with --prot-src-files of PDB_DSSP, fail with PDB bug
#50 opened Nov 20, 2017 by tonyelewis
@tonyelewis
Some pairs fail under cath-ssap with PDB_DSSP that work with PDB_DSSP_SEC bug
#49 opened Nov 20, 2017 by tonyelewis
@tonyelewis
2
Alignment acquirers and outputters should all handle regions enhancement
#48 opened Oct 16, 2017 by tonyelewis
@tonyelewis
Allow cath-ssap to restrict regions in PDB_DSSP mode enhancement
#45 opened Oct 2, 2017 by tonyelewis
@tonyelewis
Improve superpositions of multiple domains enhancement
#40 opened Aug 25, 2017 by tonyelewis
@tonyelewis
Add tests for handling MSE HETATMs before TER record
#37 opened Jun 26, 2017 by tonyelewis
@tonyelewis
Running cath-ssaps on files in other directories can causes errors reproduced
#35 opened Jun 23, 2017 by tonyelewis
@tonyelewis
2
Add a colourer for secondary-structure (and accessibility) enhancement
#33 opened Mar 27, 2017 by tonyelewis
@tonyelewis
Investigate: why does dropping sec files make some SSAP worse enhancement
#30 opened Feb 13, 2017 by tonyelewis
@tonyelewis
Consider adding MDA information to cath-resolve-hits enhancement
#28 opened Jan 11, 2017 by tonyelewis
@tonyelewis
1
Make cath-superpose input/output file extension imply the file types enhancement
#17 opened Nov 15, 2016 by tonyelewis
@tonyelewis
Make cath-superpose JSON files imply the input PDB files enhancement
#16 opened Nov 15, 2016 by tonyelewis
@tonyelewis
Make cath-superpose do the same ID to PDB file mapping that cath-ssap does enhancement
#15 opened Nov 15, 2016 by tonyelewis
@tonyelewis
Accessibility problems prevent cath-ssap aligning two similar structures bug reproduced
#8 opened Apr 12, 2016 by tonyelewis
@tonyelewis
4
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