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Conditional sampling #13

Merged
merged 171 commits into from
Jan 23, 2024
Merged

Conditional sampling #13

merged 171 commits into from
Jan 23, 2024

Commits on Jun 7, 2023

  1. new generator

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Commits on Jun 9, 2023

  1. proper prior

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  2. tibbles

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  3. circuits

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  4. tibbles too

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Commits on Jun 11, 2023

  1. no need for renaming

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  2. nvm

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    dswatson committed Jun 11, 2023
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  3. vectorize logs

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  4. nullify

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Commits on Jun 28, 2023

  1. fifelse

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  2. mid > med

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  3. ptruncnorm for CDFs

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  4. leaf_poster util

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    dswatson committed Jun 28, 2023
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  5. leaf posterior util

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  6. conditional forging

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Commits on Jun 29, 2023

  1. impose constraints

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  2. vectorize cnt, parallelize cat

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  3. par

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  4. warnings

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  5. dumb error

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Commits on Jun 30, 2023

  1. partial

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  2. pc > params, dox

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  3. dox

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  4. value != min

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Commits on Jul 1, 2023

  1. cforde Jan

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Commits on Jul 2, 2023

  1. modify comments cforde

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  2. Minor changes, typos

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  3. example

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Commits on Jul 8, 2023

  1. cvg can be 1/n

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  2. no zero-cvg leaves

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  3. dropmin

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  4. sigma0 fix

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  5. un-col_rename

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Commits on Jul 10, 2023

  1. relations > operators

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  2. optional conditioning

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  3. relation > operator

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  4. default alpha/epsilon

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  5. Merge branch 'tweaks' of https://github.com/bips-hb/arf into tweaks

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  6. lik args

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  7. vignette touchup

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  8. omega_tmp

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  9. avoid data.table checks

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  10. cleanups

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  11. eg touchup

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  12. lik test

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  13. floating point issue

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  14. clean up code

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Commits on Jul 13, 2023

  1. Fix bug with zero-prob volumes

    @jkapar
    jkapar committed Jul 13, 2023
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  2. handling zero-prob condition due cat value

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Commits on Jul 14, 2023

  1. Fix typo

    @jkapar
    jkapar committed Jul 14, 2023
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  2. fix typo

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Commits on Jul 22, 2023

  1. prep_evi

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Commits on Jul 24, 2023

  1. no more lse

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  2. prep_x

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  3. preps

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  4. categorical boost

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    dswatson committed Jul 24, 2023
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  5. enter map

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    dswatson committed Jul 24, 2023
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  6. x_real fix

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  7. leaves fix

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  8. all.equal

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  9. omega_tmp for mixed case

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  10. data.table check

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  11. conj cleanup

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  12. conj cleanup

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  13. no matrixstats

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  14. evi fix

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  15. pc > params

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Commits on Jul 26, 2023

  1. query doc

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  2. prep_evi

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  3. sw

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Commits on Jul 27, 2023

  1. warning reshuffle

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  2. warnings

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  3. cforde: some accel. & bug fix

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  4. post_x

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  5. Merge branch 'tweaks' of https://github.com/bips-hb/arf into tweaks

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  6. Update cforde.R

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    jkapar authored Jul 27, 2023
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  7. fctr fix

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  8. imports

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  9. no idx_character

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  10. vignette touchup

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    dswatson committed Jul 27, 2023
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  11. matrix colnames

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  12. data.table > data.frame

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  13. setDT

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  14. junk names

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  15. prep_x returns data.frame

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  16. revert

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  17. colnames mgmt

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  18. partial setnames

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Commits on Jul 28, 2023

  1. colorderfix, variable.factor = FALSE

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  2. cforge touchup

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  3. to_sim upfront

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Commits on Jul 29, 2023

  1. params > pc

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Commits on Jul 31, 2023

  1. no par

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  2. no par

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  3. leaf_posterior touchup

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  4. sloppy checks

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  5. leaf_post touchup

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  6. no par

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  7. null queries

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  8. MAP too

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Commits on Aug 1, 2023

  1. no par

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  2. bound tightening

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  3. forge no par

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Commits on Aug 3, 2023

  1. speed up cforde

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Commits on Aug 12, 2023

  1. accelerations

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Commits on Aug 15, 2023

  1. small code clean-up

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  2. small code clean-up

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  3. small code clean-up

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  4. faster resampler

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  5. optional

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  6. lvls

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Commits on Aug 24, 2023

  1. forde handling NAs

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  2. forde handling NAs

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  3. fix by-ref-bug in forge

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Commits on Aug 30, 2023

  1. optional pruning

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  2. steez

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  3. colnames fix

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  4. Merge branch 'tweaks' of https://github.com/bips-hb/arf into tweaks

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  5. factor_cols fix

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Commits on Sep 5, 2023

  1. expct

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Commits on Sep 6, 2023

  1. cvg speed boost

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Commits on Sep 7, 2023

  1. singletons

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Commits on Sep 8, 2023

  1. finite_bounds for forde

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Commits on Sep 9, 2023

  1. style

    @dswatson
    dswatson committed Sep 9, 2023
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  2. just boots

    @dswatson
    dswatson committed Sep 9, 2023
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  3. genfix

    @dswatson
    dswatson committed Sep 9, 2023
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Commits on Sep 11, 2023

  1. accelerations

    @jkapar
    jkapar committed Sep 11, 2023
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  2. style pts, col renaming

    @dswatson
    dswatson committed Sep 11, 2023
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Commits on Sep 12, 2023

  1. consistent pred->dt

    @dswatson
    dswatson committed Sep 12, 2023
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  2. grepl bug

    @dswatson
    dswatson committed Sep 12, 2023
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Commits on Sep 15, 2023

  1. back compatibility

    @dswatson
    dswatson committed Sep 15, 2023
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  2. hyperparameters

    @dswatson
    dswatson committed Sep 15, 2023
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  3. globalz

    @dswatson
    dswatson committed Sep 15, 2023
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Commits on Nov 3, 2023

  1. interval fix

    @dswatson
    dswatson committed Nov 3, 2023
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  2. lp redundancy fix

    @dswatson
    dswatson committed Nov 3, 2023
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Commits on Nov 8, 2023

  1. fctrs as numeric for resampling

    @dswatson
    dswatson committed Nov 8, 2023
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Commits on Nov 9, 2023

  1. check for inf values

    @dswatson
    dswatson committed Nov 9, 2023
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Commits on Nov 11, 2023

  1. match levels, precision

    @dswatson
    dswatson committed Nov 11, 2023
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  2. intgr

    @dswatson
    dswatson committed Nov 11, 2023
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  3. fix psi list

    @dswatson
    dswatson committed Nov 11, 2023
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  4. unnecessary setDFs

    @dswatson
    dswatson committed Nov 11, 2023
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  5. prep_x bug, class>type

    @dswatson
    dswatson committed Nov 11, 2023
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Commits on Nov 13, 2023

  1. precision fix

    @dswatson
    dswatson committed Nov 13, 2023
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Commits on Nov 28, 2023

  1. line switch preserves n

    @dswatson
    dswatson committed Nov 28, 2023
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Commits on Dec 1, 2023

  1. remove Jan's version of conditional sampling in this branch

    @mnwright
    mnwright committed Dec 1, 2023
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Commits on Dec 13, 2023

  1. missing values

    @dswatson
    dswatson committed Dec 13, 2023
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  2. shuffle factor_cols

    @dswatson
    dswatson committed Dec 13, 2023
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  3. levels

    @dswatson
    dswatson committed Dec 13, 2023
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Commits on Dec 14, 2023

  1. rbindlist

    @dswatson
    dswatson committed Dec 14, 2023
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  2. na.rm bug patch

    @dswatson
    dswatson committed Dec 14, 2023
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  3. decimals > precision

    @dswatson
    dswatson committed Dec 14, 2023
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Commits on Jan 5, 2024

  1. add a test for alpha>0

    @mnwright
    mnwright committed Jan 5, 2024
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  2. fix level/levels typo

    @mnwright
    mnwright committed Jan 5, 2024
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  3. don't parallelize in tests

    @mnwright
    mnwright committed Jan 5, 2024
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Commits on Jan 7, 2024

  1. no grid

    @dswatson
    dswatson committed Jan 7, 2024
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  2. infinite weights

    @dswatson
    dswatson committed Jan 7, 2024
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Commits on Jan 17, 2024

  1. add a meaningfull error message for the zero-likelihood case

    @mnwright
    mnwright committed Jan 17, 2024
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  2. sample() does not work for vector with length 1

    @mnwright
    mnwright committed Jan 17, 2024
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Commits on Jan 18, 2024

  1. geom. mean solution for inf. posteriors

    @jkapar
    jkapar committed Jan 18, 2024
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  2. geom. mean solution for inf. posteriors

    @jkapar
    jkapar committed Jan 18, 2024
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Commits on Jan 19, 2024

  1. random leaf if all zero + warning

    @mnwright
    mnwright committed Jan 19, 2024
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  2. more robust tests

    @mnwright
    mnwright committed Jan 19, 2024
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Commits on Jan 21, 2024

  1. integers to numeric if levels > 5

    @dswatson
    dswatson committed Jan 21, 2024
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  2. integers to factors or numeric

    @dswatson
    dswatson committed Jan 21, 2024
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  3. expct, no map

    @dswatson
    dswatson committed Jan 21, 2024
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  4. v0.20

    @dswatson
    dswatson committed Jan 21, 2024
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  5. headlines

    @dswatson
    dswatson committed Jan 21, 2024
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  6. conditioning

    @dswatson
    dswatson committed Jan 21, 2024
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  7. no map

    @dswatson
    dswatson committed Jan 21, 2024
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  8. fctr bug

    @dswatson
    dswatson committed Jan 21, 2024
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  9. drop map cross reference

    @dswatson
    dswatson committed Jan 21, 2024
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