transform #13003
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| name: transform | |
| on: | |
| workflow_dispatch: | |
| schedule: | |
| - cron: "5 * * * *" | |
| jobs: | |
| transform: | |
| runs-on: ubuntu-latest | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: install mamba | |
| uses: mamba-org/provision-with-micromamba@main | |
| - run: bash scripts/pipeline.sh | |
| - uses: stefanzweifel/git-auto-commit-action@v4 | |
| with: | |
| commit_message: Data update | |
| file_pattern: data/meta_lineages.csv |