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Pull requests: populationgenomics/metamist

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Pull requests list

Resolve some trivia detected by sonarqube
#967 opened Oct 1, 2024 by jmarshall • Draft
1
GraphQL Mutations
#966 opened Sep 30, 2024 by nevoodoo Loading…
18
chore(deps): refresh pip-compile outputs
#963 opened Sep 30, 2024 by renovatebotcpg bot Loading…
1 task
1
chore(deps): update all major dependencies (major)
#962 opened Sep 30, 2024 by renovatebotcpg bot Loading…
1 task
2
chore(deps): update all non-major dependencies
#961 opened Sep 30, 2024 by renovatebotcpg bot Loading…
1 task
2
Document metamist's required Python version in setup.py
#881 opened Jul 26, 2024 by jmarshall Loading…
1
Custom-cohort creation script patch
#875 opened Jul 18, 2024 by MattWellie Loading…
3
Add dedicated seqr sync module to db layers
#869 opened Jul 12, 2024 by EddieLF • Draft
4 tasks
Billing metamist compare with gcp
#859 opened Jul 8, 2024 by milo-hyben • Draft
2
Proof of concept: Allow selecting of slices of assay meta in graphql
#827 opened Jun 17, 2024 by dancoates • Draft
3
Refactor all *.from_db() routines to use from_db_json()
#821 opened Jun 12, 2024 by jmarshall Loading…
1
Custom Cohorts UI
#691 opened Feb 26, 2024 by vivbak • Draft
1
WIP: Billing graphql
#673 opened Jan 31, 2024 by milo-hyben • Draft
1
Simple script to populate billing budget history per project.
#669 opened Jan 29, 2024 by milo-hyben Loading…
3
Replaced json with orjson for large size loads
#662 opened Jan 25, 2024 by nevoodoo Loading…
1 task done
1
9
Populate tob-wgs-test metamist with nagim gvcf files
#653 opened Jan 17, 2024 by michael-harper • Draft
21
Refactor test subset script and add test cases
#621 opened Nov 22, 2023 by EddieLF • Draft
First draft of ETL GUI.
#557 opened Sep 26, 2023 by milo-hyben • Draft
Add rename_embedded_ids.py script that updates @RG SM:{id} values
#504 opened Jun 30, 2023 by jmarshall Loading…
6
first draft of family note updating script
#482 opened May 18, 2023 by EddieLF • Draft
1
Add further details on EC ingestion
#447 opened Apr 10, 2023 by vivbak Loading…
2
Reference dataset metadata: thousand-genomes and hgdp
#265 opened Aug 6, 2022 by vladsavelyev Loading…
2
Convert relationships to pedigree
#184 opened Apr 13, 2022 by illusional • Draft
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