Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Add seqr sync type #539

Open
illusional opened this issue Aug 31, 2023 · 2 comments
Open

Add seqr sync type #539

illusional opened this issue Aug 31, 2023 · 2 comments

Comments

@illusional
Copy link
Collaborator

  1. Add a new enum for seqr data type,
  2. Then, es-index typed analysis will also include a "seqr-data-type" attribute on the meta (as well as a sequencing-type)

Clarifying that:

  • Seqr projects based on a sequencing-type.

Examples will be:

  • snv
  • gcnv
  • gatk-svs
  • mito
@MattWellie
Copy link
Contributor

I've added this tag to the gatk-sv ES index generation PR
populationgenomics/production-pipelines@19c416e

@MattWellie
Copy link
Contributor

Can this be closed?

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
Status: 🔖 Ready to be worked on
Development

No branches or pull requests

2 participants