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Add seqr sync type #539

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illusional opened this issue Aug 31, 2023 · 2 comments
Open

Add seqr sync type #539

illusional opened this issue Aug 31, 2023 · 2 comments

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@illusional
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  1. Add a new enum for seqr data type,
  2. Then, es-index typed analysis will also include a "seqr-data-type" attribute on the meta (as well as a sequencing-type)

Clarifying that:

  • Seqr projects based on a sequencing-type.

Examples will be:

  • snv
  • gcnv
  • gatk-svs
  • mito
@MattWellie
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I've added this tag to the gatk-sv ES index generation PR
populationgenomics/production-pipelines@19c416e

@illusional illusional mentioned this issue Oct 5, 2023
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@EddieLF EddieLF mentioned this issue Oct 23, 2023
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@MattWellie
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Can this be closed?

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@MattWellie @illusional