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New Analysis field? #754

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MattWellie opened this issue May 2, 2024 · 0 comments
Open

New Analysis field? #754

MattWellie opened this issue May 2, 2024 · 0 comments
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@MattWellie
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class AnalysisInternal(SMBase):

Could we add an extra field to Analysis entries... 'source', or... something to that effect?

Some Analysis types are produced by multiple different pipeline stages, and often when querying I'm interested in a specific source, e.g. https://github.com/populationgenomics/production-pipelines-configuration/blob/main/config/gatk-sv/find_samples_to_batch.py#L64

If we had this populated as a native Analysis attribute there would be fewer instances where the whole Meta is required. Common values I can image for this field:

  • pipeline stages, e.g. source=Align
  • applications/software, e.g. source=GATK-SV

Not sure if this is a good idea

@MattWellie MattWellie changed the title New field? New Analysis field? May 2, 2024
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