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feat(benchmarks): Add benchmark workflow
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on: | ||
workflow_dispatch | ||
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name: "⏱️ Benchmark" | ||
jobs: | ||
benchmark: | ||
runs-on: ubuntu-latest | ||
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concurrency: | ||
group: benchmark-${{ github.ref }} | ||
cancel-in-progress: true | ||
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services: | ||
postgres: | ||
image: postgres:latest | ||
env: | ||
POSTGRES_DB: test | ||
POSTGRES_USER: postgres | ||
POSTGRES_PASSWORD: postgres | ||
ports: | ||
- 5432:5432 | ||
options: --health-cmd "pg_isready -U postgres" --health-interval 10s --health-timeout 5s --health-retries 5 | ||
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env: | ||
PGHOST: localhost | ||
PGPORT: 5432 | ||
PGDATABASE: test | ||
PGUSER: postgres | ||
PGPASSWORD: postgres | ||
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steps: | ||
- name: Install a SQL Server suite of tools | ||
uses: potatoqualitee/mssqlsuite@v1.7 | ||
with: | ||
install: sqlengine, sqlpackage, sqlclient | ||
show-log: true | ||
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- name: Configure SQL server | ||
run: | | ||
set -o xtrace | ||
sqlcmd -V 10 -S localhost -U SA -P dbatools.I0 -Q "ALTER LOGIN SA WITH DEFAULT_DATABASE = master;" | ||
- uses: actions/checkout@v4 | ||
with: | ||
fetch-depth: 0 | ||
persist-credentials: false | ||
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- name: Configure git | ||
run: | | ||
git config --local user.name "$GITHUB_ACTOR" | ||
git config --local user.email "$GITHUB_ACTOR@users.noreply.github.com" | ||
git switch ${GITHUB_HEAD_REF:-${GITHUB_REF#refs/heads/}} | ||
- uses: r-lib/actions/setup-r@v2 | ||
with: | ||
use-public-rspm: true | ||
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- uses: r-lib/actions/setup-r-dependencies@v2 | ||
with: | ||
extra-packages: any::devtools | ||
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- name: Delete previous benchmark files | ||
if: always() | ||
run: rm -rf inst/extdata/benchmark-*.rds | ||
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- name: Get SQLite version | ||
run: | | ||
version=$(Rscript -e "cat(DBI::dbGetQuery(DBI::dbConnect(RSQLite::SQLite()), 'SELECT sqlite_version();')[[1]])") | ||
echo "SQLITE_VERSION=SQLite v$version" >> $GITHUB_ENV | ||
- name: Get DuckDB version | ||
run: | | ||
version=$(Rscript -e "conn <- DBI::dbConnect(duckdb::duckdb()); cat(DBI::dbGetQuery(conn, 'SELECT version();')[[1]]); DBI::dbDisconnect(conn, shutdown = TRUE)") | ||
echo "DUCKDB_VERSION=DuckDB $version" >> $GITHUB_ENV | ||
- name: Get PostgreSQL version | ||
run: | | ||
version=$(psql --version | awk '{print $3}') | ||
echo "POSTGRES_VERSION=PostgreSQL v$version" >> $GITHUB_ENV | ||
- name: Get SQL Server version | ||
run: | | ||
version=$(sqlcmd -S localhost -U SA -P dbatools.I0 -Q "SET NOCOUNT ON; SELECT SERVERPROPERTY('productversion') AS version" -h -1 -W -b) | ||
echo "SQL_SERVER_VERSION=SQL Server v$version" >> $GITHUB_ENV | ||
- name: Install libraries to benchmark | ||
if: always() | ||
run: source("./data-raw/benchmark.R", echo=TRUE) | ||
shell: Rscript {0} | ||
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- name: Run benchmark (${{ env.SQLITE_VERSION }}) | ||
if: always() | ||
env: | ||
BACKEND: ${{ env.SQLITE_VERSION }} | ||
BACKEND_DRV: RSQLite::SQLite | ||
BACKEND_ARGS: 'list(dbname = file.path(tempdir(), "SQLite.SQLite"))' | ||
run: source("./data-raw/benchmark.R", echo=TRUE) | ||
shell: Rscript {0} | ||
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- name: Run benchmark (${{ env.DUCKDB_VERSION }}) | ||
if: always() | ||
env: | ||
BACKEND: ${{ env.DUCKDB_VERSION }} | ||
BACKEND_DRV: duckdb::duckdb | ||
BACKEND_ARGS: 'list(dbdir = file.path(tempdir(), "DuckDB.duckdb"))' | ||
run: source("./data-raw/benchmark.R", echo=TRUE) | ||
shell: Rscript {0} | ||
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- name: Run benchmark (${{ env.POSTGRES_VERSION }}) | ||
if: always() | ||
env: | ||
BACKEND: ${{ env.POSTGRES_VERSION }} | ||
BACKEND_DRV: RPostgres::Postgres | ||
run: source("./data-raw/benchmark.R", echo=TRUE) | ||
shell: Rscript {0} | ||
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- name: Run benchmark (${{ env.SQL_SERVER_VERSION }}) | ||
if: always() | ||
env: | ||
BACKEND: ${{ env.SQL_SERVER_VERSION }} | ||
BACKEND_DRV: odbc::odbc | ||
CONN_ARGS_JSON: > | ||
{ | ||
"${{ env.SQL_SERVER_VERSION }}": { | ||
"driver": "ODBC Driver 17 for SQL Server", | ||
"server": "localhost", | ||
"database": "master", | ||
"UID": "SA", | ||
"PWD": "dbatools.I0" | ||
} | ||
} | ||
run: source("./data-raw/benchmark.R", echo=TRUE) | ||
shell: Rscript {0} | ||
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- name: Display structure of benchmark files | ||
if: always() | ||
run: ls -R inst/extdata | ||
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- name: Combine benchmark results | ||
if: always() | ||
run: | | ||
benchmark_files <- list.files( | ||
"inst/extdata", | ||
pattern = "^benchmark-", | ||
full.names = TRUE, | ||
recursive = TRUE | ||
) | ||
benchmarks <- benchmark_files |> | ||
purrr::map(readRDS) |> | ||
purrr::map(tibble::as_tibble) |> | ||
purrr::reduce(rbind) | ||
benchmarks <- benchmarks |> | ||
dplyr::mutate( | ||
"version" = factor( | ||
.data$version, | ||
levels = c("CRAN", "main", setdiff(unique(benchmarks$version), c("CRAN", "main"))) | ||
) | ||
) | ||
# Save the combined benchmark results and delete the individual files | ||
dir.create(file.path("inst", "extdata"), recursive = TRUE, showWarnings = FALSE) | ||
saveRDS(benchmarks, file.path("inst", "extdata", "benchmarks.rds")) | ||
file.remove(benchmark_files) | ||
# Add note slow backends | ||
slow_backends <- benchmarks |> | ||
dplyr::distinct(.data$database, .data$n) |> | ||
dplyr::filter(.data$n < max(.data$n)) |> | ||
dplyr::pull("database") | ||
benchmarks <- benchmarks |> | ||
dplyr::mutate("database" = paste0(database, ifelse(database %in% slow_backends, "*", ""))) | ||
# Mean and standard deviation (see ggplot2::mean_se()) | ||
mean_sd <- function(x) { | ||
mu <- mean(x) | ||
sd <- sd(x) | ||
data.frame(y = mu, ymin = mu - sd, ymax = mu + sd) | ||
} | ||
# Determine subgroups | ||
groups <- setdiff(colnames(benchmarks), c("expr", "time", "benchmark_function", "database", "version", "n")) | ||
# Allow subgroups | ||
dodge <- ggplot2::position_dodge(width = 0.6) | ||
g <- ggplot2::ggplot( | ||
benchmarks, | ||
ggplot2::aes( | ||
x = version, | ||
y = time / 1e9, | ||
group = !!switch(length(groups) > 0, as.symbol(groups)), | ||
color = !!switch(length(groups) > 0, as.symbol(groups))) | ||
) + | ||
ggplot2::stat_summary(fun.data = mean_sd, geom = "pointrange", size = 0.5, linewidth = 1, position = dodge) + | ||
ggplot2::facet_grid(rows = ggplot2::vars(benchmark_function), cols = ggplot2::vars(database)) + | ||
ggplot2::labs(x = "Codebase version", y = "Time (s)") | ||
if (length(slow_backends) > 1) { | ||
g <- g + ggplot2::labs(caption = "* IMPORTANT: Benchmark data halved for this backend!") | ||
} | ||
ggplot2::ggsave("benchmarks.pdf") | ||
shell: Rscript {0} | ||
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- name: Upload benchmark summary | ||
if: always() | ||
uses: actions/upload-artifact@v4 | ||
with: | ||
name: benchmark-summary | ||
path: benchmarks.pdf | ||
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- name: Commit and push changes | ||
run: | | ||
git remote set-url origin https://$GITHUB_ACTOR:${{ secrets.GITHUB_TOKEN }}@github.com/$GITHUB_REPOSITORY.git | ||
git stash --include-untracked | ||
git pull --rebase origin ${GITHUB_HEAD_REF:-${GITHUB_REF#refs/heads/}} | ||
git stash list | grep stash@{0} && git stash pop || echo "No stash to pop" | ||
git add inst/extdata/\* | ||
git commit -m "chore: Update benchmark data" || echo "No changes to commit" | ||
git push origin ${GITHUB_HEAD_REF:-${GITHUB_REF#refs/heads/}} |