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45 Open 308 Closed
45 Open 308 Closed
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Issues list

Testing aberrant expression pipeline using external counts
#584 opened Oct 28, 2024 by TrueMaverick
1
OUTRIDER > Overexpression of TBR1 not found
#583 opened Oct 15, 2024 by juugeebee
7
AberrantSplicing module error: wrong args for environment subassignment
#581 opened Oct 10, 2024 by Wynandi
2
Merging RNA-Seq Datasets – Seeking Guidance
#580 opened Oct 9, 2024 by mariamaitoumelloul
1
rnaVariantCalling high-quality SNPs for hg38 in documentation
#578 opened Sep 17, 2024 by yunkaig
2
Earlier crash for NA values in the SEX column
#568 opened Aug 15, 2024 by Jakob37
4
Discrepancy between results_per_junction.tsv and results.tsv files
#562 opened Jul 24, 2024 by scharf-f
Error in rule AberrantExpression_pipeline_OUTRIDER_Summary_R
#560 opened Jul 11, 2024 by cariocow
2
Error in checkForAndCreateDir
#558 opened Jun 28, 2024 by pkrithivasan
@AtaJadidAhari
11
Pipeline FAILS when specifying subsets of genes to test
#549 opened May 29, 2024 by GaberBergant
2
requirementsR.txt referencing HEAD leads to irreproducibility / pipeline breaking
#538 opened May 3, 2024 by jaicher
4
CalledProcessError in installRPackages.R
#528 opened Apr 8, 2024 by gaynora7
6
Running pipeline offline in trusted research environemnt
#523 opened Feb 29, 2024 by chrisodhams
@AtaJadidAhari
1
error in mae
#518 opened Feb 7, 2024 by Acetyl-ZHOU
9
TypeError in file /DATA/drop_demo/Snakefile, line 12: expected str, bytes or os.PathLike object, not NoneType
#515 opened Feb 5, 2024 by Acetyl-ZHOU
2
DROP installation issue on linux cluster enhancement New feature or request
#510 opened Jan 23, 2024 by gianfilippo
1
AberrantSplicing pipeline error
#507 opened Jan 10, 2024 by akhilvelluva
16
ImportError: cannot import name 'get_argument_parser' from 'snakemake'
#505 opened Dec 26, 2023 by sgomes-catarina
3
Error with installing outrider and fraser on M1 Mac
#496 opened Nov 17, 2023 by HMorsy
Building plots with abberant splicing results
#495 opened Nov 16, 2023 by SergeyBioinformatics
5
Missed call - not clear why
#491 opened Aug 29, 2023 by gevro
11
DROP_1.3.3.yaml package update required?
#489 opened Aug 10, 2023 by chrisodhams
9
drop demo fails at rnaVariantCalling/pipeline/Snakefile line 446
#477 opened Jun 20, 2023 by nicholas-owen
18
Estimated run-time for FRASER2
#476 opened Jun 6, 2023 by chrisodhams
13
Error in merge.data.table() - AberrantExpression_pipeline_OUTRIDER_pvalsOutrider_R
#474 opened May 31, 2023 by canankolakoglu
4
ProTip! Updated in the last three days: updated:>2024-10-28.