Merge branch 'try-compile-workflow' of github.com:populationgenomics/…

…metamist into try-compile-workflow
populationgenomics · Sep 23, 2024 · 3ae568c · 3ae568c
2 parents 5fe97ac + 6c8d877
commit 3ae568c
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diff --git a/requirements-dev.txt b/requirements-dev.txt
@@ -1,8 +1,8 @@
 #
-# This file is autogenerated by pip-compile with Python 3.11
+# This file is autogenerated by pip-compile with Python 3.10
 # by the following command:
 #
-#    pip-compile requirements-dev.in
+#    pip-compile --output-file=requirements-dev.txt requirements-dev.in requirements.in
 #
 aiohappyeyeballs==2.4.0
     # via aiohttp
@@ -23,6 +23,8 @@ astroid==3.2.4
     # via pylint
 async-lru==2.0.4
     # via -r requirements.in
+async-timeout==4.0.3
+    # via aiohttp
 attrs==24.2.0
     # via
     #   aiohttp
@@ -110,6 +112,10 @@ docker==7.1.0
     # via testcontainers
 email-validator==2.2.0
     # via fastapi
+exceptiongroup==1.2.2
+    # via
+    #   anyio
+    #   pytest
 fastapi[all]==0.112.2
     # via
     #   -r requirements.in
@@ -427,6 +433,12 @@ testcontainers[mysql]==4.8.1
     # via -r requirements-dev.in
 toml==0.10.2
     # via cpg-utils
+tomli==2.0.1
+    # via
+    #   black
+    #   coverage
+    #   pylint
+    #   pytest
 tomlkit==0.13.2
     # via pylint
 typer==0.12.5
@@ -437,16 +449,22 @@ types-pymysql==1.1.0.20240524
     # via -r requirements-dev.in
 typing-extensions==4.12.2
     # via
+    #   anyio
+    #   astroid
+    #   async-lru
     #   azure-core
     #   azure-storage-blob
     #   azure-storage-file-datalake
+    #   black
+    #   cloudpathlib
     #   fastapi
     #   pydantic
     #   pydantic-core
     #   sqlalchemy
     #   strawberry-graphql
     #   testcontainers
     #   typer
+    #   uvicorn
 ujson==5.10.0
     # via fastapi
 urllib3==2.2.2

diff --git a/requirements.txt b/requirements.txt
@@ -1,5 +1,5 @@
 #
-# This file is autogenerated by pip-compile with Python 3.11
+# This file is autogenerated by pip-compile with Python 3.10
 # by the following command:
 #
 #    pip-compile requirements.in
@@ -14,33 +14,35 @@ aiosignal==1.3.1
     # via aiohttp
 annotated-types==0.7.0
     # via pydantic
-anyio==4.4.0
+anyio==4.6.0
     # via
     #   httpx
     #   starlette
     #   watchfiles
 async-lru==2.0.4
     # via -r requirements.in
+async-timeout==4.0.3
+    # via aiohttp
 attrs==24.2.0
     # via aiohttp
-azure-core==1.30.2
+azure-core==1.31.0
     # via
     #   azure-storage-blob
     #   azure-storage-file-datalake
-azure-storage-blob==12.22.0
+azure-storage-blob==12.23.0
     # via
     #   azure-storage-file-datalake
     #   cloudpathlib
-azure-storage-file-datalake==12.16.0
+azure-storage-file-datalake==12.17.0
     # via cloudpathlib
 backoff==2.2.1
     # via -r requirements.in
-boto3==1.35.12
+boto3==1.35.24
     # via
     #   -r requirements.in
     #   cloudpathlib
     #   cpg-utils
-botocore==1.35.12
+botocore==1.35.24
     # via
     #   -r requirements.in
     #   boto3
@@ -79,6 +81,8 @@ dnspython==2.6.1
     # via email-validator
 email-validator==2.2.0
     # via fastapi
+exceptiongroup==1.2.2
+    # via anyio
 fastapi[all]==0.112.2
     # via
     #   -r requirements.in
@@ -91,7 +95,7 @@ frozenlist==1.4.1
     # via
     #   aiohttp
     #   aiosignal
-google-api-core[grpc]==2.19.2
+google-api-core[grpc]==2.20.0
     # via
     #   google-cloud-appengine-logging
     #   google-cloud-bigquery
@@ -100,7 +104,7 @@ google-api-core[grpc]==2.19.2
     #   google-cloud-pubsub
     #   google-cloud-secret-manager
     #   google-cloud-storage
-google-auth==2.34.0
+google-auth==2.35.0
     # via
     #   -r requirements.in
     #   cpg-utils
@@ -144,7 +148,7 @@ googleapis-common-protos[grpc]==1.65.0
     #   grpcio-status
 graphql-core==3.2.4
     # via strawberry-graphql
-greenlet==3.0.3
+greenlet==3.1.1
     # via sqlalchemy
 grpc-google-iam-v1==0.12.7
     # via
@@ -173,7 +177,7 @@ httptools==0.6.1
     # via uvicorn
 httpx==0.27.2
     # via fastapi
-idna==3.8
+idna==3.10
     # via
     #   anyio
     #   email-validator
@@ -198,7 +202,7 @@ markupsafe==2.1.5
     # via jinja2
 mdurl==0.1.2
     # via markdown-it-py
-multidict==6.0.5
+multidict==6.1.0
     # via
     #   aiohttp
     #   yarl
@@ -214,7 +218,7 @@ proto-plus==1.24.0
     #   google-cloud-logging
     #   google-cloud-pubsub
     #   google-cloud-secret-manager
-protobuf==4.25.4
+protobuf==4.25.5
     # via
     #   google-api-core
     #   google-cloud-appengine-logging
@@ -227,24 +231,24 @@ protobuf==4.25.4
     #   grpc-google-iam-v1
     #   grpcio-status
     #   proto-plus
-pyasn1==0.6.0
+pyasn1==0.6.1
     # via
     #   pyasn1-modules
     #   rsa
-pyasn1-modules==0.4.0
+pyasn1-modules==0.4.1
     # via google-auth
 pycparser==2.22
     # via cffi
-pydantic==2.8.2
+pydantic==2.9.2
     # via
     #   fastapi
     #   pydantic-extra-types
     #   pydantic-settings
-pydantic-core==2.20.1
+pydantic-core==2.23.4
     # via pydantic
 pydantic-extra-types==2.9.0
     # via fastapi
-pydantic-settings==2.4.0
+pydantic-settings==2.5.2
     # via fastapi
 pygments==2.18.0
     # via rich
@@ -260,7 +264,7 @@ python-dotenv==1.0.1
     # via
     #   pydantic-settings
     #   uvicorn
-python-multipart==0.0.9
+python-multipart==0.0.10
     # via
     #   fastapi
     #   strawberry-graphql
@@ -276,7 +280,7 @@ requests==2.32.3
     #   google-api-core
     #   google-cloud-bigquery
     #   google-cloud-storage
-rich==13.8.0
+rich==13.8.1
     # via typer
 rsa==4.9
     # via google-auth
@@ -296,9 +300,9 @@ sniffio==1.3.1
     # via
     #   anyio
     #   httpx
-sqlalchemy==2.0.34
+sqlalchemy==2.0.35
     # via databases
-starlette==0.38.4
+starlette==0.38.6
     # via fastapi
 strawberry-graphql[fastapi]==0.235.1
     # via -r requirements.in
@@ -310,18 +314,23 @@ typer==0.12.5
     # via fastapi-cli
 typing-extensions==4.12.2
     # via
+    #   anyio
+    #   async-lru
     #   azure-core
     #   azure-storage-blob
     #   azure-storage-file-datalake
+    #   cloudpathlib
     #   fastapi
+    #   multidict
     #   pydantic
     #   pydantic-core
     #   sqlalchemy
     #   strawberry-graphql
     #   typer
+    #   uvicorn
 ujson==5.10.0
     # via fastapi
-urllib3==2.2.2
+urllib3==2.2.3
     # via
     #   botocore
     #   requests
@@ -334,9 +343,9 @@ uvloop==0.20.0
     # via uvicorn
 watchfiles==0.24.0
     # via uvicorn
-websockets==13.0.1
+websockets==13.1
     # via uvicorn
 wrapt==1.16.0
     # via deprecated
-yarl==1.9.10
+yarl==1.11.1
     # via aiohttp