Bump the minor-and-patch group with 17 updates

Bumps the minor-and-patch group with 17 updates:

| Package | From | To |
| --- | --- | --- |
| [boto3](https://github.com/boto/boto3) | `1.35.12` | `1.35.24` |
| [botocore](https://github.com/boto/botocore) | `1.35.12` | `1.35.24` |
| [fastapi[all]](https://github.com/fastapi/fastapi) | `0.112.2` | `0.115.0` |
| [google-auth](https://github.com/googleapis/google-auth-library-python) | `2.34.0` | `2.35.0` |
| [google-cloud-bigquery](https://github.com/googleapis/python-bigquery) | `3.11.4` | `3.25.0` |
| [google-cloud-pubsub](https://github.com/googleapis/python-pubsub) | `2.18.3` | `2.23.1` |
| [google-cloud-secret-manager](https://github.com/googleapis/google-cloud-python) | `2.0.0` | `2.20.2` |
| [pylint](https://github.com/pylint-dev/pylint) | `3.2.7` | `3.3.0` |
| [pytest](https://github.com/pytest-dev/pytest) | `8.3.2` | `8.3.3` |
| [python-dateutil](https://github.com/dateutil/dateutil) | `2.8.2` | `2.9.0.post0` |
| [pytz](https://github.com/stub42/pytz) | `2024.1` | `2024.2` |
| [slack-sdk](https://github.com/slackapi/python-slack-sdk) | `3.20.2` | `3.33.1` |
| [urllib3](https://github.com/urllib3/urllib3) | `2.2.2` | `2.2.3` |
| [strawberry-graphql[fastapi]](https://github.com/strawberry-graphql/strawberry) | `0.235.1` | `0.242.0` |
| [airtable-python-wrapper](https://github.com/gtalarico/airtable-python-wrapper) | `0.15.1` | `0.15.3` |
| [sample-metadata](https://github.com/populationgenomics/sample-metadata) | `5.2.1` | `5.7.2` |
| [uvicorn](https://github.com/encode/uvicorn) | `0.29.0` | `0.30.6` |


Updates `boto3` from 1.35.12 to 1.35.24
- [Release notes](https://github.com/boto/boto3/releases)
- [Commits](boto/boto3@1.35.12...1.35.24)

Updates `botocore` from 1.35.12 to 1.35.24
- [Changelog](https://github.com/boto/botocore/blob/develop/CHANGELOG.rst)
- [Commits](boto/botocore@1.35.12...1.35.24)

Updates `fastapi[all]` from 0.112.2 to 0.115.0
- [Release notes](https://github.com/fastapi/fastapi/releases)
- [Commits](fastapi/fastapi@0.112.2...0.115.0)

Updates `google-auth` from 2.34.0 to 2.35.0
- [Release notes](https://github.com/googleapis/google-auth-library-python/releases)
- [Changelog](https://github.com/googleapis/google-auth-library-python/blob/main/CHANGELOG.md)
- [Commits](googleapis/google-auth-library-python@v2.34.0...v2.35.0)

Updates `google-cloud-bigquery` from 3.11.4 to 3.25.0
- [Release notes](https://github.com/googleapis/python-bigquery/releases)
- [Changelog](https://github.com/googleapis/python-bigquery/blob/main/CHANGELOG.md)
- [Commits](googleapis/python-bigquery@v3.11.4...v3.25.0)

Updates `google-cloud-pubsub` from 2.18.3 to 2.23.1
- [Release notes](https://github.com/googleapis/python-pubsub/releases)
- [Changelog](https://github.com/googleapis/python-pubsub/blob/main/CHANGELOG.md)
- [Commits](googleapis/python-pubsub@v2.18.3...v2.23.1)

Updates `google-cloud-secret-manager` from 2.0.0 to 2.20.2
- [Release notes](https://github.com/googleapis/google-cloud-python/releases)
- [Changelog](https://github.com/googleapis/google-cloud-python/blob/main/packages/google-cloud-documentai/CHANGELOG.md)
- [Commits](googleapis/google-cloud-python@translate-2.0.0...google-cloud-secret-manager-v2.20.2)

Updates `pylint` from 3.2.7 to 3.3.0
- [Release notes](https://github.com/pylint-dev/pylint/releases)
- [Commits](pylint-dev/pylint@v3.2.7...v3.3.0)

Updates `pytest` from 8.3.2 to 8.3.3
- [Release notes](https://github.com/pytest-dev/pytest/releases)
- [Changelog](https://github.com/pytest-dev/pytest/blob/main/CHANGELOG.rst)
- [Commits](pytest-dev/pytest@8.3.2...8.3.3)

Updates `python-dateutil` from 2.8.2 to 2.9.0.post0
- [Release notes](https://github.com/dateutil/dateutil/releases)
- [Changelog](https://github.com/dateutil/dateutil/blob/master/NEWS)
- [Commits](dateutil/dateutil@2.8.2...2.9.0.post0)

Updates `pytz` from 2024.1 to 2024.2
- [Release notes](https://github.com/stub42/pytz/releases)
- [Commits](stub42/pytz@release_2024.1...release_2024.2)

Updates `slack-sdk` from 3.20.2 to 3.33.1
- [Release notes](https://github.com/slackapi/python-slack-sdk/releases)
- [Commits](slackapi/python-slack-sdk@v3.20.2...v3.33.1)

Updates `urllib3` from 2.2.2 to 2.2.3
- [Release notes](https://github.com/urllib3/urllib3/releases)
- [Changelog](https://github.com/urllib3/urllib3/blob/main/CHANGES.rst)
- [Commits](urllib3/urllib3@2.2.2...2.2.3)

Updates `strawberry-graphql[fastapi]` from 0.235.1 to 0.242.0
- [Release notes](https://github.com/strawberry-graphql/strawberry/releases)
- [Changelog](https://github.com/strawberry-graphql/strawberry/blob/main/CHANGELOG.md)
- [Commits](strawberry-graphql/strawberry@0.235.1...0.242.0)

Updates `airtable-python-wrapper` from 0.15.1 to 0.15.3
- [Changelog](https://github.com/gtalarico/pyairtable/blob/0.15.3/HISTORY.md)
- [Commits](gtalarico/pyairtable@0.15.1...0.15.3)

Updates `sample-metadata` from 5.2.1 to 5.7.2
- [Commits](https://github.com/populationgenomics/sample-metadata/commits)

Updates `uvicorn` from 0.29.0 to 0.30.6
- [Release notes](https://github.com/encode/uvicorn/releases)
- [Changelog](https://github.com/encode/uvicorn/blob/master/CHANGELOG.md)
- [Commits](encode/uvicorn@0.29.0...0.30.6)

---
updated-dependencies:
- dependency-name: boto3
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: minor-and-patch
- dependency-name: botocore
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: minor-and-patch
- dependency-name: fastapi[all]
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: minor-and-patch
- dependency-name: google-auth
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: minor-and-patch
- dependency-name: google-cloud-bigquery
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: minor-and-patch
- dependency-name: google-cloud-pubsub
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: minor-and-patch
- dependency-name: google-cloud-secret-manager
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: minor-and-patch
- dependency-name: pylint
  dependency-type: direct:development
  update-type: version-update:semver-minor
  dependency-group: minor-and-patch
- dependency-name: pytest
  dependency-type: direct:development
  update-type: version-update:semver-patch
  dependency-group: minor-and-patch
- dependency-name: python-dateutil
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: minor-and-patch
- dependency-name: pytz
  dependency-type: direct:development
  update-type: version-update:semver-minor
  dependency-group: minor-and-patch
- dependency-name: slack-sdk
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: minor-and-patch
- dependency-name: urllib3
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: minor-and-patch
- dependency-name: strawberry-graphql[fastapi]
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: minor-and-patch
- dependency-name: airtable-python-wrapper
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: minor-and-patch
- dependency-name: sample-metadata
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: minor-and-patch
- dependency-name: uvicorn
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: minor-and-patch
...

Signed-off-by: dependabot[bot] <support@github.com>

requirements-dev.txt

@@ -19,7 +19,7 @@ anyio==4.4.0
     #   httpx
     #   starlette
     #   watchfiles
-astroid==3.2.4
+astroid==3.3.3
     # via pylint
 async-lru==2.0.4
     # via -r requirements.in
@@ -43,12 +43,12 @@ black==24.8.0
     # via -r requirements-dev.in
 blinker==1.8.2
     # via flask
-boto3==1.35.12
+boto3==1.35.24
     # via
     #   -r requirements.in
     #   cloudpathlib
     #   cpg-utils
-botocore==1.35.12
+botocore==1.35.24
     # via
     #   -r requirements.in
     #   boto3
@@ -110,7 +110,7 @@ docker==7.1.0
     # via testcontainers
 email-validator==2.2.0
     # via fastapi
-fastapi[all]==0.112.2
+fastapi[all]==0.115.0
     # via
     #   -r requirements.in
     #   strawberry-graphql
@@ -143,20 +143,22 @@ google-api-core[grpc]==2.19.2
     #   google-cloud-pubsub
     #   google-cloud-secret-manager
     #   google-cloud-storage
-google-auth==2.34.0
+google-auth==2.35.0
     # via
     #   -r requirements.in
     #   cpg-utils
     #   google-api-core
     #   google-cloud-appengine-logging
+    #   google-cloud-bigquery
     #   google-cloud-core
+    #   google-cloud-pubsub
     #   google-cloud-secret-manager
     #   google-cloud-storage
 google-cloud-appengine-logging==1.4.5
     # via google-cloud-logging
 google-cloud-audit-log==0.3.0
     # via google-cloud-logging
-google-cloud-bigquery==3.11.4
+google-cloud-bigquery==3.25.0
     # via
     #   -r requirements-dev.in
     #   -r requirements.in
@@ -167,7 +169,7 @@ google-cloud-core==2.4.1
     #   google-cloud-storage
 google-cloud-logging==2.7.0
     # via -r requirements.in
-google-cloud-pubsub==2.18.3
+google-cloud-pubsub==2.23.1
     # via
     #   -r requirements-dev.in
     #   -r requirements.in
@@ -201,7 +203,6 @@ grpc-google-iam-v1==0.12.7
 grpcio==1.66.1
     # via
     #   google-api-core
-    #   google-cloud-bigquery
     #   google-cloud-pubsub
     #   googleapis-common-protos
     #   grpc-google-iam-v1
@@ -299,7 +300,6 @@ proto-plus==1.24.0
     # via
     #   google-api-core
     #   google-cloud-appengine-logging
-    #   google-cloud-bigquery
     #   google-cloud-logging
     #   google-cloud-pubsub
     #   google-cloud-secret-manager
@@ -308,7 +308,6 @@ protobuf==4.25.4
     #   google-api-core
     #   google-cloud-appengine-logging
     #   google-cloud-audit-log
-    #   google-cloud-bigquery
     #   google-cloud-pubsub
     #   google-cloud-secret-manager
     #   google-cloud-storage
@@ -343,20 +342,20 @@ pygments==2.18.0
     # via
     #   rich
     #   strawberry-graphql
-pylint==3.2.7
+pylint==3.3.0
     # via -r requirements-dev.in
 pymysql[rsa]==1.1.1
     # via
     #   -r requirements-dev.in
     #   aiomysql
     #   testcontainers
-pytest==8.3.2
+pytest==8.3.3
     # via
     #   -r requirements-dev.in
     #   pytest-cov
 pytest-cov==5.0.0
     # via -r requirements-dev.in
-python-dateutil==2.8.2
+python-dateutil==2.9.0.post0
     # via
     #   -r requirements.in
     #   botocore
@@ -370,7 +369,7 @@ python-multipart==0.0.9
     # via
     #   fastapi
     #   strawberry-graphql
-pytz==2024.1
+pytz==2024.2
     # via -r requirements-dev.in
 pyyaml==6.0.2
     # via
@@ -403,7 +402,7 @@ six==1.16.0
     #   google-cloud-storage
     #   isodate
     #   python-dateutil
-slack-sdk==3.20.2
+slack-sdk==3.33.1
     # via -r requirements.in
 sniffio==1.3.1
     # via
@@ -417,7 +416,7 @@ starlette==0.38.4
     # via
     #   fastapi
     #   strawberry-graphql
-strawberry-graphql[debug-server,fastapi]==0.235.1
+strawberry-graphql[debug-server,fastapi]==0.242.0
     # via
     #   -r requirements-dev.in
     #   -r requirements.in
@@ -449,13 +448,13 @@ typing-extensions==4.12.2
     #   typer
 ujson==5.10.0
     # via fastapi
-urllib3==2.2.2
+urllib3==2.2.3
     # via
     #   botocore
     #   docker
     #   requests
     #   testcontainers
-uvicorn[standard]==0.29.0
+uvicorn[standard]==0.30.6
     # via
     #   -r requirements.in
     #   fastapi

requirements.in

@@ -9,14 +9,14 @@ async_lru
 cloudpathlib
 requests
 google-auth>=2.19.0
-google-cloud-bigquery==3.11.4
+google-cloud-bigquery==3.25.0
 google-cloud-logging==2.7.0
-google-cloud-pubsub==2.18.3
+google-cloud-pubsub==2.23.1
 google-cloud-storage==1.43.0
-uvicorn==0.29.0
-fastapi[all]==0.112.2
-strawberry-graphql[fastapi]==0.235.1
+uvicorn==0.30.6
+fastapi[all]==0.115.0
+strawberry-graphql[fastapi]==0.242.0
 databases[mysql]==0.9.0
 cryptography>=41.0.0
-python-dateutil==2.8.2
-slack-sdk==3.20.2
+python-dateutil==2.9.0.post0
+slack-sdk==3.33.1

requirements.txt

@@ -35,12 +35,12 @@ azure-storage-file-datalake==12.16.0
     # via cloudpathlib
 backoff==2.2.1
     # via -r requirements.in
-boto3==1.35.12
+boto3==1.35.24
     # via
     #   -r requirements.in
     #   cloudpathlib
     #   cpg-utils
-botocore==1.35.12
+botocore==1.35.24
     # via
     #   -r requirements.in
     #   boto3
@@ -79,7 +79,7 @@ dnspython==2.6.1
     # via email-validator
 email-validator==2.2.0
     # via fastapi
-fastapi[all]==0.112.2
+fastapi[all]==0.115.0
     # via
     #   -r requirements.in
     #   strawberry-graphql
@@ -100,20 +100,22 @@ google-api-core[grpc]==2.19.2
     #   google-cloud-pubsub
     #   google-cloud-secret-manager
     #   google-cloud-storage
-google-auth==2.34.0
+google-auth==2.35.0
     # via
     #   -r requirements.in
     #   cpg-utils
     #   google-api-core
     #   google-cloud-appengine-logging
+    #   google-cloud-bigquery
     #   google-cloud-core
+    #   google-cloud-pubsub
     #   google-cloud-secret-manager
     #   google-cloud-storage
 google-cloud-appengine-logging==1.4.5
     # via google-cloud-logging
 google-cloud-audit-log==0.3.0
     # via google-cloud-logging
-google-cloud-bigquery==3.11.4
+google-cloud-bigquery==3.25.0
     # via -r requirements.in
 google-cloud-core==2.4.1
     # via
@@ -122,7 +124,7 @@ google-cloud-core==2.4.1
     #   google-cloud-storage
 google-cloud-logging==2.7.0
     # via -r requirements.in
-google-cloud-pubsub==2.18.3
+google-cloud-pubsub==2.23.1
     # via -r requirements.in
 google-cloud-secret-manager==2.20.2
     # via cpg-utils
@@ -154,7 +156,6 @@ grpc-google-iam-v1==0.12.7
 grpcio==1.66.1
     # via
     #   google-api-core
-    #   google-cloud-bigquery
     #   google-cloud-pubsub
     #   googleapis-common-protos
     #   grpc-google-iam-v1
@@ -210,7 +211,6 @@ proto-plus==1.24.0
     # via
     #   google-api-core
     #   google-cloud-appengine-logging
-    #   google-cloud-bigquery
     #   google-cloud-logging
     #   google-cloud-pubsub
     #   google-cloud-secret-manager
@@ -219,7 +219,6 @@ protobuf==4.25.4
     #   google-api-core
     #   google-cloud-appengine-logging
     #   google-cloud-audit-log
-    #   google-cloud-bigquery
     #   google-cloud-pubsub
     #   google-cloud-secret-manager
     #   google-cloud-storage
@@ -250,7 +249,7 @@ pygments==2.18.0
     # via rich
 pymysql==1.1.1
     # via aiomysql
-python-dateutil==2.8.2
+python-dateutil==2.9.0.post0
     # via
     #   -r requirements.in
     #   botocore
@@ -290,7 +289,7 @@ six==1.16.0
     #   google-cloud-storage
     #   isodate
     #   python-dateutil
-slack-sdk==3.20.2
+slack-sdk==3.33.1
     # via -r requirements.in
 sniffio==1.3.1
     # via
@@ -300,7 +299,7 @@ sqlalchemy==2.0.34
     # via databases
 starlette==0.38.4
     # via fastapi
-strawberry-graphql[fastapi]==0.235.1
+strawberry-graphql[fastapi]==0.242.0
     # via -r requirements.in
 tabulate==0.9.0
     # via cpg-utils
@@ -321,11 +320,11 @@ typing-extensions==4.12.2
     #   typer
 ujson==5.10.0
     # via fastapi
-urllib3==2.2.2
+urllib3==2.2.3
     # via
     #   botocore
     #   requests
-uvicorn[standard]==0.29.0
+uvicorn[standard]==0.30.6
     # via
     #   -r requirements.in
     #   fastapi

update_sample_status/requirements.txt

@@ -1,3 +1,3 @@
-airtable-python-wrapper==0.15.1
-google-cloud-secret-manager==2.0.0
-sample-metadata==5.2.1
+airtable-python-wrapper==0.15.3
+google-cloud-secret-manager==2.20.2
+sample-metadata==5.7.2