GitHub - BU-ISCIII/all_YML_files: Compilation of all the YAML files used in the unit (both for backup and sharing purposes)

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Compilation of all the YAML files used in the unit (both for backup and sharing purposes)

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Name		Name	Last commit message	Last commit date
Latest commit History 1 Commit
README_MTBSEQenv		README_MTBSEQenv
ariba.yml		ariba.yml
artic-ncov2019.yml		artic-ncov2019.yml
artic-ncov2019_v2.yml		artic-ncov2019_v2.yml
assembly.yml_BACK		assembly.yml_BACK
assembly_prokka.yml		assembly_prokka.yml
base.yml		base.yml
bbtools.yml		bbtools.yml
bcgtree.yml		bcgtree.yml
biopython.yml		biopython.yml
cansnper.yml		cansnper.yml
cdhit.yml		cdhit.yml
chewbacca.yml		chewbacca.yml
chewbbaca.yml		chewbbaca.yml
chromosomer.yml		chromosomer.yml
cutadapt.yml		cutadapt.yml
errors.txt		errors.txt
fastp.yml		fastp.yml
gatk4.yml		gatk4.yml
gffcompare_v0.11.2.yml		gffcompare_v0.11.2.yml
guppy.yml		guppy.yml
immuno_rnaseq.yml		immuno_rnaseq.yml
kraken2.yml		kraken2.yml
mash_v2.2.yml		mash_v2.2.yml
mtbseq.yml		mtbseq.yml
muscle.yml		muscle.yml
nanopore.yml		nanopore.yml
nextflow.yml		nextflow.yml
nf-core-mag-1.0.0.yml		nf-core-mag-1.0.0.yml
nf-core-sarek-2.6.yml		nf-core-sarek-2.6.yml
nf-core-viralrecon-1.0.0.yml		nf-core-viralrecon-1.0.0.yml
nf-core-viralrecon-1.0dev.yml		nf-core-viralrecon-1.0dev.yml
nf-core-viralrecon-1.2.0dev.yml		nf-core-viralrecon-1.2.0dev.yml
pangolin.yml		pangolin.yml
picard.yml		picard.yml
plasmidIDdev.yml		plasmidIDdev.yml
prokka.yml		prokka.yml
pyfasta.yml		pyfasta.yml
qc_exome_tools.yml		qc_exome_tools.yml
qc_exome_tools_2.yml		qc_exome_tools_2.yml
rbase_v.3.6_environment.yml		rbase_v.3.6_environment.yml
rebaler_v0.2.0.yml		rebaler_v0.2.0.yml
rnaseq.yml		rnaseq.yml
rnaseq_new.yml		rnaseq_new.yml
seqkit_v0.12.0.yml		seqkit_v0.12.0.yml
snippy.yml		snippy.yml
sratools.yml		sratools.yml
taranis.yml		taranis.yml
unicycler.yml		unicycler.yml
vep.yml		vep.yml
vigor.yml		vigor.yml
viral_dup.yml		viral_dup.yml
virus_illumina.yml		virus_illumina.yml
virus_illumina_assembly.yml		virus_illumina_assembly.yml
virus_illumina_consensus.yml		virus_illumina_consensus.yml
virus_illumina_sispa.yml		virus_illumina_sispa.yml